Detailed information NTG0887833

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: RUL31_RS13575
• Genome accession: NZ_CP135964
• Coordinates: 2779937..2782270 (-)
• Length: 777 a.a.
• NCBI ID: WP_088117605.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain CD303
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2774937..2787270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RUL31_RS13540 (RUL31_13540)	-	2775268..2775606 (-)	339	WP_004429433.1	YqxA family protein	-
RUL31_RS13545 (RUL31_13545)	spoIIP	2775625..2776833 (-)	1209	WP_315915421.1	stage II sporulation protein P	-
RUL31_RS13550 (RUL31_13550)	gpr	2776900..2778003 (-)	1104	WP_010789252.1	GPR endopeptidase	-
RUL31_RS13555 (RUL31_13555)	rpsT	2778208..2778474 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
RUL31_RS13560 (RUL31_13560)	holA	2778489..2779532 (-)	1044	WP_106360516.1	DNA polymerase III subunit delta	-
RUL31_RS13565 (RUL31_13565)	-	2779572..2779721 (-)	150	WP_181279838.1	hypothetical protein	-
RUL31_RS13570 (RUL31_13570)	-	2779762..2779896 (+)	135	WP_064505211.1	YqzM family protein	-
RUL31_RS13575 (RUL31_13575)	comEC	2779937..2782270 (-)	2334	WP_088117605.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RUL31_RS13580 (RUL31_13580)	-	2782277..2782846 (-)	570	WP_003325392.1	ComE operon protein 2	-
RUL31_RS13585 (RUL31_13585)	comEA	2782914..2783537 (-)	624	WP_106270954.1	helix-hairpin-helix domain-containing protein	Machinery gene
RUL31_RS13590 (RUL31_13590)	comER	2783621..2784439 (+)	819	WP_315915426.1	late competence protein ComER	-
RUL31_RS13595 (RUL31_13595)	-	2784509..2785249 (-)	741	WP_315915427.1	class I SAM-dependent methyltransferase	-
RUL31_RS13600 (RUL31_13600)	rsfS	2785246..2785602 (-)	357	WP_003325387.1	ribosome silencing factor	-
RUL31_RS13605 (RUL31_13605)	yqeK	2785619..2786179 (-)	561	WP_010789259.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RUL31_RS13610 (RUL31_13610)	-	2786169..2786738 (-)	570	WP_315915429.1	nicotinate-nucleotide adenylyltransferase	-
RUL31_RS13615 (RUL31_13615)	yhbY	2786750..2787040 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 86958.74 Da
• Isoelectric Point: 8.5571

>NTDB_id=887833 RUL31_RS13575 WP_088117605.1 2779937..2782270(-) (comEC) [Bacillus atrophaeus strain CD303]
MKNTRLLLPLAAASATAGIAAASFFSALLIFVLSLFFVYIKTKQLSLVFVSLSAFTIYFFLTSVIDSHNVSSYDFGTYKL
RAVIQEIPKIDGDRMSMVVRTPDGEKWAASYKMESLAEKEKLSQIEPGTACTFTGSLEKPKNATVPGTFDYKQYLYSQHI
HWNYSITAIQNCSTADGIQYRLLSVRKSLISFVNDHVPESSAGIVQALILGDRFYLMDDVLEAYQKLGVVHLLAISGLHV
GIVTAGIFYVLIRIGITREKAAILLLLFLPVYTILTGAAPSVMRAALMSGLYFIGSLWGKRMNPSIVICLSYLILLLFNP
YHLFQIGFQLSFAVSFSLILSSSIFKKLQSGGLVQLAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPF
SMIGFLLLSLSEPVGEYLFYWFDYIIRWSDKLIKYAADIEQFTVIAARPNALVLFGLIGSIVVLLTAMEKSALYQRLLSV
LLFIATLFLVVIFPRLDPEGEVDMLDIGQGDSMFISAPYQRGHVMIDTGGILSYLTEPWREKWHPFSLSEKVLIPFLTAK
GIKQLDALILTHADQDHIGEAKVLIKRHKVKQLIVPKGFVSEPNDEKVLRTAQQEGICITEVKRGDTFQIKDLQFRVLSP
ETPDPNSKNNSSLVLWMKTGHLSWVLTGDLEKEGEQEIMKAFPDLKADILKAGHHGSKGSTGEEFVRQLKPKAAIISAGE
NNRYHHPHQEVLDILKAHSVRIFRTDQSGTIQYRFKSGFGTFSVYPPYDTTGMTETN

Nucleotide

• Length: 2334 bp

>NTDB_id=887833 RUL31_RS13575 WP_088117605.1 2779937..2782270(-) (comEC) [Bacillus atrophaeus strain CD303]
ATGAAGAACACACGCCTTCTTTTGCCTCTGGCGGCAGCATCAGCAACGGCTGGCATAGCTGCTGCCTCCTTTTTCTCCGC
ACTTCTCATATTCGTTTTATCACTCTTCTTTGTTTATATCAAAACAAAACAGCTCTCACTCGTTTTTGTTAGTTTATCGG
CTTTTACGATCTATTTTTTCTTAACCTCTGTTATCGATTCTCATAATGTATCGTCCTATGACTTCGGCACCTATAAGCTT
CGGGCGGTGATTCAGGAAATTCCAAAGATTGACGGAGACCGTATGTCCATGGTAGTTCGAACGCCGGATGGGGAAAAGTG
GGCTGCATCATATAAAATGGAGTCGCTTGCTGAAAAGGAAAAACTTTCACAGATAGAGCCAGGGACGGCTTGTACGTTTA
CCGGTTCTTTAGAAAAGCCGAAAAACGCAACGGTTCCCGGCACTTTCGATTATAAACAGTATCTGTACAGCCAGCATATT
CACTGGAATTACTCGATAACAGCAATCCAAAATTGCAGCACGGCAGATGGAATACAGTATAGGCTTTTAAGCGTGAGAAA
GTCTCTTATTTCATTTGTGAATGACCATGTTCCGGAATCCTCAGCAGGCATCGTGCAGGCGCTCATCCTGGGTGACAGAT
TTTATCTTATGGACGATGTGCTGGAAGCGTATCAAAAGCTCGGAGTTGTCCATCTGCTTGCGATTTCAGGGCTTCATGTA
GGTATTGTGACAGCTGGTATATTCTATGTGCTCATTCGAATTGGGATAACGAGAGAGAAGGCTGCCATTCTGCTGCTGTT
GTTTTTGCCTGTTTATACGATTTTAACCGGAGCGGCTCCGTCTGTGATGCGCGCAGCTCTTATGTCAGGGCTTTATTTTA
TCGGCAGTTTGTGGGGGAAGCGTATGAACCCTTCAATAGTGATCTGTCTTTCTTATTTAATTCTCCTTCTGTTTAATCCG
TATCATCTTTTTCAAATAGGGTTTCAGCTCTCTTTTGCTGTAAGTTTCTCTTTAATACTTTCTTCCTCTATTTTTAAAAA
ACTTCAAAGCGGGGGACTCGTGCAGCTCGCCATGGTGTCACTCATCGCTCAGCTTGGATCGCTTCCCATCCTTATCTATT
ATTTTCAGCAGTTTTCTCTTATCAGTATACCGATGAATATCATTATGGTGCCTTTTTATACGATGTTTGTCATGCCGTTT
TCTATGATAGGTTTTCTTTTGTTAAGTTTGTCTGAGCCGGTCGGTGAGTACCTGTTTTATTGGTTTGATTACATCATACG
CTGGAGTGACAAGCTGATAAAGTATGCTGCAGATATTGAACAATTTACAGTGATTGCAGCCCGTCCAAATGCGCTTGTCT
TGTTTGGGCTGATTGGATCTATCGTTGTTTTGCTGACAGCCATGGAGAAATCCGCCCTTTACCAAAGACTTCTGTCTGTG
CTGCTCTTTATCGCAACGCTTTTTCTGGTGGTTATTTTTCCTCGCCTGGACCCCGAGGGAGAAGTGGATATGCTTGATAT
CGGTCAGGGAGACAGCATGTTTATCAGCGCTCCGTATCAGCGCGGCCATGTGATGATAGACACTGGAGGAATCCTTTCAT
ACTTAACAGAGCCATGGAGGGAAAAATGGCATCCTTTTTCGCTTAGCGAAAAGGTGCTCATTCCTTTCTTAACAGCAAAA
GGCATTAAACAGCTTGATGCCTTAATTTTGACTCATGCGGACCAAGACCATATAGGGGAAGCAAAGGTTCTGATCAAGCG
GCATAAAGTCAAACAGCTCATTGTGCCGAAAGGATTTGTTTCTGAACCGAATGATGAAAAAGTGCTGCGGACCGCACAGC
AGGAGGGAATTTGCATTACAGAGGTTAAACGAGGCGACACCTTTCAGATAAAGGATTTACAGTTTCGCGTACTGTCGCCT
GAGACTCCCGACCCGAACAGCAAAAATAACTCTTCTCTCGTGCTATGGATGAAAACAGGTCATCTCAGCTGGGTGCTGAC
AGGCGATCTCGAAAAGGAAGGGGAACAGGAGATCATGAAAGCTTTTCCGGATCTAAAAGCGGATATTTTAAAGGCGGGGC
ATCATGGCAGTAAAGGATCTACCGGAGAAGAGTTTGTCCGCCAGCTGAAGCCAAAAGCGGCAATTATTTCTGCCGGTGAG
AATAATCGGTATCACCATCCCCATCAGGAAGTCCTTGATATATTAAAAGCTCATTCTGTCCGCATTTTCCGCACTGATCA
AAGCGGGACGATCCAATACAGATTTAAAAGCGGGTTTGGAACCTTTTCTGTCTATCCTCCATATGATACAACAGGTATGA
CGGAGACGAATTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Competence protein (Competence) (208-467)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	66.152	100	0.662