Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RSK81_RS01570 Genome accession   NZ_CP135591
Coordinates   290154..291410 (+) Length   418 a.a.
NCBI ID   WP_268681395.1    Uniprot ID   A0AA96NQU5
Organism   Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 285154..296410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RSK81_RS01550 (RSK81_01550) tkt 285623..287599 (+) 1977 WP_061603077.1 transketolase -
  RSK81_RS01555 (RSK81_01555) yajC 287777..288112 (+) 336 WP_002893835.1 preprotein translocase subunit YajC -
  RSK81_RS01560 (RSK81_01560) - 288355..289104 (+) 750 WP_002899059.1 isoprenyl transferase -
  RSK81_RS01565 (RSK81_01565) - 289123..289926 (+) 804 WP_004192411.1 phosphatidate cytidylyltransferase -
  RSK81_RS01570 (RSK81_01570) eeP 290154..291410 (+) 1257 WP_268681395.1 RIP metalloprotease RseP Regulator
  RSK81_RS01575 (RSK81_01575) - 291476..293326 (+) 1851 WP_268681396.1 proline--tRNA ligase -
  RSK81_RS01580 (RSK81_01580) - 293417..293797 (+) 381 WP_032916189.1 PH domain-containing protein -
  RSK81_RS01585 (RSK81_01585) - 293854..294396 (-) 543 WP_227969852.1 DUF1307 domain-containing protein -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45766.23 Da        Isoelectric Point: 6.5101

>NTDB_id=887010 RSK81_RS01570 WP_268681395.1 290154..291410(+) (eeP) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MQFITFIIIFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIGKDGTAYTIRILPLGGYVRMAGWGEDSTDIKVG
TPASLTLDAEGKVVRINLSGKKVDQTALPMNVTGFDFEEKLEITGLVLDELKTYAVDHDATIVEEDGTEVRIAPLDVQYQ
NASIWGRLITNFAGPMNNFILSVLVFMLLAFVQGGVRDENSNHFQVMDGSAIAAAGVQNNDQILKINDYEINNWADLTSA
LAKITGKSKEAPALSVTYKHGSETKEITVQPKKEGNRYLLGVSPTVKTGFWDKVVGGFTAAWSTTVRILSALKDIIFNFN
INKLGGPVAIYNFSSQAAEQGLPAVLSLLAMLSLNIGIFNLIPIPALDGGKIVLNILEAIRRKPLKRETETYITLSGVAI
MVILMIAVTWNDIMKLFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=887010 RSK81_RS01570 WP_268681395.1 290154..291410(+) (eeP) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGCAGTTTATAACCTTTATTATTATTTTTGGGATCATTGTGGTGGTCCATGAGTTCGGACACTTCTACTTTGCAAAGAA
GTCCGGCATTTTGGTCAGAGAGTTCGCTATCGGTATGGGACCCAAGATTTTCTCCCATATTGGTAAGGACGGGACGGCCT
ACACGATTCGGATCTTACCCTTGGGGGGCTATGTGCGCATGGCCGGCTGGGGGGAAGACTCCACTGACATTAAGGTGGGA
ACACCGGCTAGTCTGACCTTGGATGCAGAGGGCAAGGTGGTTCGTATCAATCTCTCTGGCAAAAAGGTTGACCAGACAGC
TCTGCCCATGAATGTGACTGGCTTTGACTTTGAGGAAAAGCTGGAAATCACTGGTCTTGTCCTTGACGAGCTCAAGACTT
ATGCAGTAGATCATGATGCAACGATTGTTGAAGAAGACGGCACTGAGGTGCGGATTGCACCGCTGGACGTTCAGTATCAA
AATGCTAGTATCTGGGGCCGTCTCATCACCAACTTTGCTGGGCCTATGAATAACTTCATCCTGAGTGTGCTGGTATTTAT
GCTGCTGGCCTTTGTTCAGGGCGGCGTTCGCGATGAAAACAGCAATCATTTCCAAGTTATGGATGGTAGTGCTATAGCAG
CTGCTGGGGTTCAAAATAATGACCAAATCCTTAAGATTAATGACTATGAGATTAACAATTGGGCGGATCTAACCAGTGCT
CTGGCGAAAATCACAGGCAAGAGCAAGGAAGCGCCGGCCTTGTCTGTTACCTACAAACACGGCAGCGAAACGAAAGAGAT
TACCGTACAGCCTAAAAAAGAAGGCAATCGTTATCTGCTAGGGGTATCTCCAACGGTCAAGACAGGCTTTTGGGACAAGG
TAGTTGGCGGTTTTACTGCAGCTTGGTCTACTACGGTGCGCATTTTGTCAGCTCTGAAAGATATCATCTTCAATTTCAAT
ATCAATAAGCTGGGCGGTCCGGTCGCTATTTACAATTTCAGCAGTCAGGCTGCAGAGCAAGGTTTGCCAGCAGTACTCAG
TCTTTTGGCCATGCTGTCACTCAATATCGGTATTTTCAATCTGATTCCTATTCCAGCCTTGGACGGCGGAAAGATTGTCC
TCAATATTCTAGAGGCTATCCGCAGAAAACCTCTGAAAAGAGAAACGGAGACCTATATCACTCTGTCTGGAGTGGCTATT
ATGGTCATCCTGATGATTGCCGTTACCTGGAACGATATTATGAAATTATTCTTCTAA

Domains


Predicted by InterproScan.

(5-404)

(205-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

67.308

99.522

0.67

  eeP Streptococcus thermophilus LMD-9

67.067

99.522

0.667