Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   RRV97_RS10610 Genome accession   NZ_CP135440
Coordinates   2228990..2229685 (+) Length   231 a.a.
NCBI ID   WP_315611489.1    Uniprot ID   A0AA96NE07
Organism   Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2223990..2234685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRV97_RS10590 (RRV97_10590) - 2224893..2225672 (+) 780 WP_003684015.1 exodeoxyribonuclease III -
  RRV97_RS10595 (RRV97_10595) - 2225659..2226003 (+) 345 WP_003749424.1 hypothetical protein -
  RRV97_RS10600 (RRV97_10600) - 2226015..2226548 (+) 534 WP_315611487.1 alpha/beta hydrolase -
  RRV97_RS10605 (RRV97_10605) - 2226708..2228819 (+) 2112 WP_315611488.1 TonB-dependent receptor -
  RRV97_RS10610 (RRV97_10610) dsbA2 2228990..2229685 (+) 696 WP_315611489.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  RRV97_RS10615 (RRV97_10615) ffh 2229854..2231224 (-) 1371 WP_315611490.1 signal recognition particle protein -
  RRV97_RS10620 (RRV97_10620) - 2231408..2232220 (+) 813 WP_315611491.1 inner membrane protein YpjD -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25385.91 Da        Isoelectric Point: 5.3625

>NTDB_id=886651 RRV97_RS10610 WP_315611489.1 2228990..2229685(+) (dsbA2) [Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055]
MKLKTLALTSLTLLVLAACGKQAETSVPADSAQSSTSAPATPAALTEGVNYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEIAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=886651 RRV97_RS10610 WP_315611489.1 2228990..2229685(+) (dsbA2) [Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055]
ATGAAACTGAAAACCTTAGCCTTGACTTCATTAACCCTGTTGGTATTGGCCGCTTGCGGCAAACAGGCGGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAGCACATCCGCCCCGGCAACCCCTGCCGCATTGACAGAAGGTGTCAATTACACCGTCT
TGTCCAACCCGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGCGCC
CATTTGGAGCCGGTCTTGAGTGAACACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTTTGGGG
TGATGAAATGAAACCTCTGGCACGTTTGGCGGCCGCAGTGGAAATAGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAACCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGTTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCCGAAAGCCAAGCACGTGCGGCTCAAATGGAAGAATTGACCAATAA
ATTCCAAATCAGCGGCACACCGACCGTGATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAACTGGTGGACAAAGTACGCGAAGAGCAGAAAAAACCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(65-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.537

100

0.965
  dsbA1 Neisseria meningitidis MC58

70.386

100

0.71