Detailed information NTG0886489

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RRV45_RS19840
• Genome accession: NZ_CP135435
• Coordinates: 3964782..3965924 (-)
• Length: 380 a.a.
• NCBI ID: WP_315666378.1
• Uniprot ID: A0AA96MV45
• Organism: Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3959782..3970924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RRV45_RS19810 (RRV45_19810)	-	3959790..3960398 (-)	609	WP_315666372.1	ComF family protein	-
RRV45_RS19815 (RRV45_19815)	-	3960484..3961980 (-)	1497	WP_315666373.1	DEAD/DEAH box helicase	-
RRV45_RS19820 (RRV45_19820)	-	3962044..3962886 (-)	843	WP_315666374.1	DegV family protein	-
RRV45_RS19825 (RRV45_19825)	sda	3963026..3963181 (-)	156	WP_315666375.1	sporulation histidine kinase inhibitor Sda	-
RRV45_RS19830 (RRV45_19830)	-	3963411..3963695 (+)	285	WP_315666376.1	hypothetical protein	-
RRV45_RS19835 (RRV45_19835)	degU	3963910..3964596 (-)	687	WP_315666377.1	response regulator transcription factor	Regulator
RRV45_RS19840 (RRV45_19840)	degS	3964782..3965924 (-)	1143	WP_315666378.1	sensor histidine kinase	Regulator
RRV45_RS19845 (RRV45_19845)	-	3966817..3967455 (+)	639	WP_315666379.1	YigZ family protein	-
RRV45_RS19850 (RRV45_19850)	-	3967558..3968595 (+)	1038	WP_315666380.1	LCP family protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 43930.78 Da
• Isoelectric Point: 7.1919

>NTDB_id=886489 RRV45_RS19840 WP_315666378.1 3964782..3965924(-) (degS) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MSNKKFDTKTLDMILEQMVEAVGSSKDEVFQIGEQCRKEHLTLSDELKEVKALVKKSIDEGDRLEAQTRFARKKLSEVSK
HFKDYSEAEVRDAYEKAHRLQMDYSMNQQLEKQLRDRRDDIERRLVGLSETIERAEHLISQISVVMNYLMSDLKQVGEML
ENAKLKQEFGLKIIEAQEEERKRLSREIHDGPAQMMANVMMRSDLIERVYKERGGPAAIGEIRDLKKMVRSALYEVRRII
YDLRPMALDDLGLVPTLKKYLATIEEYHKSIRIEFSNIKEEKRLPGKYEVALFRLIQESVQNALKHADANTITVRLEIDK
SKVTVVIKDDGKGFDIQEKKHNSFGIMGMRERVELLEGQMAIDSAVGKGTIVIIQVPLNM

Nucleotide

• Length: 1143 bp

>NTDB_id=886489 RRV45_RS19840 WP_315666378.1 3964782..3965924(-) (degS) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
GTGAGTAATAAGAAATTTGATACGAAAACACTTGACATGATATTAGAGCAAATGGTTGAAGCAGTTGGTTCGAGCAAGGA
CGAAGTGTTTCAAATTGGTGAGCAATGCCGCAAGGAGCATTTAACATTATCCGATGAGCTAAAAGAAGTGAAGGCGCTTG
TTAAGAAGTCTATTGACGAAGGGGACAGGCTTGAAGCTCAAACCCGTTTTGCCAGAAAGAAGCTATCTGAGGTTAGCAAG
CACTTCAAGGACTATTCTGAGGCTGAGGTTCGGGATGCATATGAAAAGGCTCACCGCCTGCAAATGGATTATTCCATGAA
TCAGCAGCTCGAAAAGCAGCTCCGGGACAGGCGGGATGATATTGAGAGAAGGCTTGTGGGCTTAAGTGAAACGATTGAAC
GAGCCGAGCATTTGATTTCGCAAATTTCAGTGGTTATGAATTATTTAATGAGTGATCTGAAACAGGTTGGAGAAATGCTG
GAAAACGCCAAGCTGAAGCAGGAATTTGGCTTGAAGATCATCGAAGCACAGGAAGAAGAGCGTAAGCGGCTGTCCCGTGA
AATCCATGATGGTCCTGCACAGATGATGGCGAATGTGATGATGCGTTCCGATTTAATTGAACGAGTATATAAGGAGCGTG
GGGGTCCTGCTGCAATTGGGGAAATCCGTGATCTTAAGAAAATGGTCCGCAGCGCTCTCTATGAGGTTCGCAGGATTATT
TATGATTTGCGCCCAATGGCACTTGACGATTTAGGCTTAGTCCCGACCCTCAAAAAATACTTGGCGACCATCGAAGAATA
TCATAAATCTATTAGAATAGAATTTTCAAATATAAAAGAGGAAAAACGTCTGCCTGGTAAATATGAAGTTGCTCTTTTCC
GCCTCATTCAGGAATCCGTGCAAAATGCTTTAAAGCACGCTGACGCCAATACAATTACAGTCAGACTAGAGATTGATAAG
TCCAAGGTAACGGTAGTCATTAAAGATGATGGAAAAGGCTTCGATATTCAAGAAAAGAAACATAATTCTTTTGGGATAAT
GGGCATGAGAGAAAGAGTAGAGCTGCTCGAAGGTCAGATGGCCATCGATTCAGCAGTTGGAAAAGGGACCATTGTCATCA
TACAGGTTCCATTAAATATGTAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (289-378)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	60.519	100	0.613