Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   RRV45_RS14735 Genome accession   NZ_CP135435
Coordinates   2966516..2967307 (-) Length   263 a.a.
NCBI ID   WP_315665449.1    Uniprot ID   A0AA96MTX1
Organism   Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2961516..2972307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRV45_RS14715 (RRV45_14715) yqiS 2962025..2962924 (-) 900 WP_315665445.1 phosphate butyryltransferase -
  RRV45_RS14720 (RRV45_14720) - 2963125..2965194 (-) 2070 WP_315665446.1 sigma-54-dependent Fis family transcriptional regulator -
  RRV45_RS14725 (RRV45_14725) - 2965442..2965678 (+) 237 WP_315665447.1 DUF2627 domain-containing protein -
  RRV45_RS14730 (RRV45_14730) - 2965712..2966443 (-) 732 WP_315665448.1 glycerophosphodiester phosphodiesterase -
  RRV45_RS14735 (RRV45_14735) spo0A 2966516..2967307 (-) 792 WP_315665449.1 sporulation transcription factor Spo0A Regulator
  RRV45_RS14740 (RRV45_14740) spoIVB 2967601..2968887 (-) 1287 WP_315665450.1 SpoIVB peptidase -
  RRV45_RS14745 (RRV45_14745) recN 2969011..2970714 (-) 1704 WP_315665451.1 DNA repair protein RecN Machinery gene
  RRV45_RS14750 (RRV45_14750) ahrC 2970733..2971182 (-) 450 WP_315665452.1 transcriptional regulator AhrC/ArgR -
  RRV45_RS14755 (RRV45_14755) - 2971382..2972224 (-) 843 WP_315665453.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 29278.88 Da        Isoelectric Point: 6.6110

>NTDB_id=886474 RRV45_RS14735 WP_315665449.1 2966516..2967307(-) (spo0A) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MKKIKVCVVDDNRELVGLLEEYISTQEDMEVVGVGHNGQECLDILDQEDPDVLILDIIMPHLDGLAVLGKMREMKKANLP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLASHIRQVSGKANPVIRKPSTSSYRSQVESKPKNLDASITSIIHEI
GVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMSK
AKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 792 bp        

>NTDB_id=886474 RRV45_RS14735 WP_315665449.1 2966516..2967307(-) (spo0A) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
GTGAAGAAAATTAAAGTTTGTGTTGTCGATGACAATAGAGAGCTTGTCGGGCTTTTAGAAGAATATATTTCAACTCAGGA
AGATATGGAAGTTGTGGGTGTTGGTCATAATGGACAGGAATGCCTCGATATTTTAGATCAAGAAGATCCTGATGTTCTTA
TTTTAGATATAATTATGCCTCATTTAGATGGTTTAGCGGTTCTTGGGAAGATGCGGGAAATGAAAAAGGCTAATTTGCCA
AATGTGATTATGCTTACTGCTTTTGGACAGGAGGACGTAACGAAAAAAGCAGTTGATTTGGGCGCCTCCTATTTTATTCT
CAAGCCATTTGATATGGAGAATCTTGCTAGTCATATTCGTCAAGTGAGTGGAAAAGCAAATCCAGTTATTAGAAAGCCAT
CCACTTCATCTTATCGGTCACAAGTGGAATCAAAGCCCAAGAATCTCGATGCAAGCATAACGAGCATCATTCATGAGATA
GGTGTGCCGGCGCATATTAAAGGCTATATGTATCTTCGTGAAGCGATTTCAATGGTATATAATGATATTGAGCTCCTCGG
TTCGATTACAAAAGTGTTATATCCTGATATTGCGAAGAAATACAATACAACGGCAAGCCGTGTAGAGCGTGCTATTCGCC
ATGCGATTGAAGTAGCCTGGAGCAGGGGGAATATTGATTCCATTTCGTCCCTATTCGGCTACACTGTGTCTATGTCTAAA
GCGAAACCAACCAATTCAGAATTCATTGCAATGGTCGCTGATAAATTAAGGCTTGAGCATAAAGCTTCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(153-256)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

82.022

100

0.833