Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RRV45_RS07665 Genome accession   NZ_CP135435
Coordinates   1542358..1542552 (+) Length   64 a.a.
NCBI ID   WP_315668231.1    Uniprot ID   A0AA96MZ29
Organism   Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1537358..1547552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRV45_RS07645 (RRV45_07645) - 1539176..1539367 (-) 192 WP_315668227.1 DUF2929 family protein -
  RRV45_RS07650 (RRV45_07650) - 1539549..1540286 (+) 738 WP_315668228.1 hydrolase -
  RRV45_RS07655 (RRV45_07655) - 1540417..1541235 (+) 819 WP_315668229.1 hypothetical protein -
  RRV45_RS07660 (RRV45_07660) med 1541376..1542335 (+) 960 WP_315668230.1 BMP family ABC transporter substrate-binding protein Regulator
  RRV45_RS07665 (RRV45_07665) comZ 1542358..1542552 (+) 195 WP_315668231.1 ComZ family protein Regulator
  RRV45_RS07670 (RRV45_07670) - 1542591..1542971 (-) 381 WP_315668232.1 hypothetical protein -
  RRV45_RS07675 (RRV45_07675) - 1543271..1544203 (+) 933 WP_315668233.1 beta-ketoacyl-ACP synthase III -
  RRV45_RS07680 (RRV45_07680) fabF 1544285..1545523 (+) 1239 WP_315668234.1 beta-ketoacyl-ACP synthase II -
  RRV45_RS07685 (RRV45_07685) ltrA 1546002..1547387 (+) 1386 WP_315668235.1 group II intron reverse transcriptase/maturase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7377.59 Da        Isoelectric Point: 4.2564

>NTDB_id=886464 RRV45_RS07665 WP_315668231.1 1542358..1542552(+) (comZ) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MHSTEKTMEFMQIAMKYLPEAKQQLEEAGVELSLEMIQPFMSLFTKVMNEAYEMGKADALAEKE

Nucleotide


Download         Length: 195 bp        

>NTDB_id=886464 RRV45_RS07665 WP_315668231.1 1542358..1542552(+) (comZ) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
ATGCATTCAACAGAAAAAACGATGGAATTCATGCAAATTGCCATGAAATATCTTCCAGAAGCAAAGCAGCAATTAGAAGA
AGCTGGAGTAGAATTATCCCTTGAAATGATTCAGCCATTCATGAGTCTCTTTACAAAGGTTATGAATGAAGCATATGAAA
TGGGAAAAGCAGATGCACTAGCAGAAAAGGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

71.667

93.75

0.672