Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   RRV45_RS07660 Genome accession   NZ_CP135435
Coordinates   1541376..1542335 (+) Length   319 a.a.
NCBI ID   WP_315668230.1    Uniprot ID   A0AA96MXY3
Organism   Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1536376..1547335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRV45_RS07645 (RRV45_07645) - 1539176..1539367 (-) 192 WP_315668227.1 DUF2929 family protein -
  RRV45_RS07650 (RRV45_07650) - 1539549..1540286 (+) 738 WP_315668228.1 hydrolase -
  RRV45_RS07655 (RRV45_07655) - 1540417..1541235 (+) 819 WP_315668229.1 hypothetical protein -
  RRV45_RS07660 (RRV45_07660) med 1541376..1542335 (+) 960 WP_315668230.1 BMP family ABC transporter substrate-binding protein Regulator
  RRV45_RS07665 (RRV45_07665) comZ 1542358..1542552 (+) 195 WP_315668231.1 ComZ family protein Regulator
  RRV45_RS07670 (RRV45_07670) - 1542591..1542971 (-) 381 WP_315668232.1 hypothetical protein -
  RRV45_RS07675 (RRV45_07675) - 1543271..1544203 (+) 933 WP_315668233.1 beta-ketoacyl-ACP synthase III -
  RRV45_RS07680 (RRV45_07680) fabF 1544285..1545523 (+) 1239 WP_315668234.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35551.12 Da        Isoelectric Point: 4.6530

>NTDB_id=886463 RRV45_RS07660 WP_315668230.1 1541376..1542335(+) (med) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MRKLFVRFGILLLSLLLLSSCGQAMSSGKLKKAGLLIPDTINDQVWGTKGYKGLLKIQSQHNIEVYYKEGMNSQLVVERA
VKEFDQKGVNIIFGHGNEYAEYFNQLSPSYPHIHFVSFNGDAENTNTTSLNFEGYAMGFFGGMIAGHMTKTNVIGIIAAY
EWQPEIEGFYEGANYENPQVDVMIEYVGNWDDARKAIELLNKITAKGADVIYPAGDGYNVPVIEQVKEKGHYAIGYISDQ
SDLGESAVLTSTIQHVDVLYELVAERFDKGELKSGNLSFDFQEDVITLGKFSSDVDQEFINNINTAIAEYRKTGELPSK

Nucleotide


Download         Length: 960 bp        

>NTDB_id=886463 RRV45_RS07660 WP_315668230.1 1541376..1542335(+) (med) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
ATGCGGAAATTATTTGTACGATTTGGGATTCTTCTTTTAAGCCTTCTTTTATTGTCCTCCTGCGGACAAGCAATGTCATC
AGGCAAACTAAAGAAAGCGGGCTTATTAATCCCTGATACGATAAATGATCAAGTATGGGGAACTAAAGGCTATAAAGGAT
TGTTAAAGATTCAATCCCAACATAATATCGAGGTTTATTATAAAGAGGGCATGAATTCACAACTAGTTGTTGAACGTGCG
GTTAAAGAATTCGACCAAAAAGGCGTTAATATTATTTTTGGCCATGGTAATGAATATGCGGAATACTTTAATCAGCTTTC
ACCTAGCTACCCCCATATCCATTTTGTCAGTTTTAATGGAGATGCGGAAAATACCAATACTACAAGTTTAAATTTTGAAG
GGTATGCAATGGGTTTTTTCGGTGGAATGATTGCAGGTCATATGACTAAGACTAATGTTATTGGAATTATTGCAGCATAT
GAGTGGCAGCCTGAAATTGAAGGCTTTTATGAAGGGGCCAATTATGAAAATCCACAAGTAGATGTCATGATTGAATATGT
AGGCAATTGGGATGATGCTAGAAAAGCGATTGAATTATTAAATAAGATAACGGCAAAAGGTGCAGATGTTATTTATCCAG
CCGGTGATGGCTACAACGTTCCTGTTATCGAGCAGGTGAAAGAGAAGGGCCATTATGCAATTGGATATATATCTGACCAG
TCAGATCTGGGTGAATCAGCCGTTTTAACTAGCACGATCCAGCATGTGGATGTTCTTTATGAATTGGTGGCAGAGAGATT
TGATAAAGGGGAGCTCAAATCCGGAAATCTGTCATTTGATTTTCAAGAGGATGTAATTACTCTTGGAAAATTTAGCTCAG
ATGTGGACCAAGAATTTATTAATAATATAAATACAGCCATTGCAGAATATCGAAAAACTGGAGAACTTCCAAGTAAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.822

98.433

0.53