Detailed information NTG0886179

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RP314_RS02810
• Genome accession: NZ_CP135199
• Coordinates: 545346..546509 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CMML21-47
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 540346..551509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RP314_RS02790 (RP314_02790)	-	540762..541958 (+)	1197	WP_077722930.1	glycosyltransferase	-
RP314_RS02795 (RP314_02795)	-	542091..543167 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
RP314_RS02800 (RP314_02800)	-	543257..544471 (-)	1215	WP_070082459.1	LCP family protein	-
RP314_RS02805 (RP314_02805)	-	544476..545123 (-)	648	WP_060657503.1	YigZ family protein	-
RP314_RS02810 (RP314_02810)	degS	545346..546509 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
RP314_RS02815 (RP314_02815)	degU	546586..547275 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RP314_RS02820 (RP314_02820)	-	547373..548221 (+)	849	WP_003151387.1	DegV family protein	-
RP314_RS02825 (RP314_02825)	comFA	548329..549714 (+)	1386	WP_077722929.1	DEAD/DEAH box helicase	Machinery gene
RP314_RS02830 (RP314_02830)	-	549772..550056 (+)	285	WP_017418816.1	late competence development ComFB family protein	-
RP314_RS02835 (RP314_02835)	comFC	550062..550751 (+)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
RP314_RS02840 (RP314_02840)	-	550825..551244 (+)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=886179 RP314_RS02810 WP_003151385.1 545346..546509(+) (degS) [Bacillus velezensis strain CMML21-47]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=886179 RP314_RS02810 WP_003151385.1 545346..546509(+) (degS) [Bacillus velezensis strain CMML21-47]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948