Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AABJ87_RS16640 | Genome accession | NZ_AP027642 |
| Coordinates | 3358769..3359284 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130211.1 | Uniprot ID | A0ABR8T9Y4 |
| Organism | Escherichia coli strain PSJ-32-1 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3353769..3364284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ87_RS16595 (VEE41_31760) | csrA | 3354356..3354541 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| AABJ87_RS16625 (VEE41_31770) | yqaB | 3355999..3356565 (+) | 567 | WP_000273289.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| AABJ87_RS16630 (VEE41_31780) | yqaA | 3356562..3356990 (+) | 429 | WP_001287454.1 | YqaA family protein | - |
| AABJ87_RS16635 (VEE41_31790) | gshA | 3357063..3358619 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| AABJ87_RS16640 (VEE41_31800) | luxS | 3358769..3359284 (+) | 516 | WP_001130211.1 | S-ribosylhomocysteine lyase | Regulator |
| AABJ87_RS16645 (VEE41_31810) | emrB | 3359348..3360886 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| AABJ87_RS16650 (VEE41_31820) | emrA | 3360903..3362075 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| AABJ87_RS16655 (VEE41_31830) | emrR | 3362202..3362732 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| AABJ87_RS16660 (VEE41_31840) | ygaH | 3362823..3363158 (-) | 336 | WP_000119766.1 | L-valine transporter subunit YgaH | - |
| AABJ87_RS16665 (VEE41_31850) | ygaZ | 3363181..3363885 (-) | 705 | WP_096851255.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19416.19 Da Isoelectric Point: 5.0362
>NTDB_id=88581 AABJ87_RS16640 WP_001130211.1 3358769..3359284(+) (luxS) [Escherichia coli strain PSJ-32-1]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=88581 AABJ87_RS16640 WP_001130211.1 3358769..3359284(+) (luxS) [Escherichia coli strain PSJ-32-1]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.099 |
100 |
0.731 |