Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QN329_RS10705 Genome accession   NZ_CP135103
Coordinates   2100727..2101452 (-) Length   241 a.a.
NCBI ID   WP_000912307.1    Uniprot ID   A0AAV3JGZ9
Organism   Streptococcus agalactiae strain HU36/21     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2095727..2106452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN329_RS10670 (QN329_10665) rnpM 2095736..2096032 (-) 297 WP_001140526.1 RNase P modulator RnpM -
  QN329_RS10675 (QN329_10670) nusA 2096054..2097205 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  QN329_RS10680 (QN329_10675) rimP 2097241..2097717 (-) 477 WP_047210184.1 ribosome maturation factor RimP -
  QN329_RS10690 (QN329_10685) trmB 2098208..2098843 (-) 636 WP_017647022.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QN329_RS10695 (QN329_10690) ccrZ 2098833..2099633 (-) 801 WP_000155919.1 cell cycle regulator CcrZ -
  QN329_RS10700 (QN329_10695) pptB 2099691..2100725 (-) 1035 WP_017647021.1 ABC transporter permease Regulator
  QN329_RS10705 (QN329_10700) pptA 2100727..2101452 (-) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  QN329_RS10710 (QN329_10705) - 2101524..2101710 (+) 187 Protein_2037 hypothetical protein -
  QN329_RS10715 (QN329_10710) - 2101762..2102265 (-) 504 WP_017647020.1 hypothetical protein -
  QN329_RS10720 (QN329_10715) - 2102601..2103020 (+) 420 WP_017647019.1 HIT family protein -
  QN329_RS10725 (QN329_10720) - 2103017..2103313 (+) 297 WP_017647018.1 hypothetical protein -
  QN329_RS10730 (QN329_10725) brpA 2103377..2104684 (-) 1308 WP_000708160.1 biofilm formation/cell division transcriptional regulator BrpA -
  QN329_RS10735 (QN329_10730) - 2104693..2105214 (-) 522 WP_017647017.1 GNAT family N-acetyltransferase -
  QN329_RS10740 (QN329_10735) tsaE 2105207..2105650 (-) 444 WP_032459127.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26835.26 Da        Isoelectric Point: 4.5704

>NTDB_id=885399 QN329_RS10705 WP_000912307.1 2100727..2101452(-) (pptA) [Streptococcus agalactiae strain HU36/21]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=885399 QN329_RS10705 WP_000912307.1 2100727..2101452(-) (pptA) [Streptococcus agalactiae strain HU36/21]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768