Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QN329_RS09250 Genome accession   NZ_CP135103
Coordinates   1808639..1809448 (-) Length   269 a.a.
NCBI ID   WP_001289498.1    Uniprot ID   X5KFV3
Organism   Streptococcus agalactiae strain HU36/21     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1803639..1814448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN329_RS09235 (QN329_09240) smc 1803860..1807399 (-) 3540 WP_000478785.1 chromosome segregation protein SMC -
  QN329_RS09240 (QN329_09245) rnc 1807407..1808093 (-) 687 WP_000661527.1 ribonuclease III -
  QN329_RS09245 (QN329_09250) - 1808268..1808636 (-) 369 WP_000719384.1 YbaN family protein -
  QN329_RS09250 (QN329_09255) vicX 1808639..1809448 (-) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  QN329_RS09255 (QN329_09260) vicK 1809452..1810801 (-) 1350 WP_001065469.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QN329_RS09260 (QN329_09265) vicR 1810794..1811504 (-) 711 WP_000722052.1 response regulator YycF Regulator
  QN329_RS09265 (QN329_09270) - 1811843..1812598 (+) 756 WP_000053148.1 amino acid ABC transporter ATP-binding protein -
  QN329_RS09270 (QN329_09275) - 1812610..1813410 (+) 801 WP_000946173.1 transporter substrate-binding domain-containing protein -
  QN329_RS09275 (QN329_09280) - 1813423..1814118 (+) 696 WP_000173639.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30273.24 Da        Isoelectric Point: 6.2265

>NTDB_id=885390 QN329_RS09250 WP_001289498.1 1808639..1809448(-) (vicX) [Streptococcus agalactiae strain HU36/21]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=885390 QN329_RS09250 WP_001289498.1 1808639..1809448(-) (vicX) [Streptococcus agalactiae strain HU36/21]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGACGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTTCTTGCAGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATACTAGTTACCCATGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCTAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCTTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCCCCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5KFV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766