Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QN329_RS02455 Genome accession   NZ_CP135103
Coordinates   413414..414187 (-) Length   257 a.a.
NCBI ID   WP_000456085.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain HU36/21     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 408414..419187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN329_RS02430 (QN329_02430) - 408989..409228 (-) 240 WP_079254669.1 helix-turn-helix domain-containing protein -
  QN329_RS02435 (QN329_02435) - 409395..409592 (-) 198 WP_000285199.1 DUF951 domain-containing protein -
  QN329_RS02440 (QN329_02440) - 409602..410495 (-) 894 WP_000987447.1 diacylglycerol/lipid kinase family protein -
  QN329_RS02445 (QN329_02445) dnaN 410553..411689 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  QN329_RS02450 (QN329_02450) dnaA 411844..413205 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  QN329_RS02455 (QN329_02455) spo0J 413414..414187 (-) 774 WP_000456085.1 ParB/RepB/Spo0J family partition protein Regulator
  QN329_RS02460 (QN329_02460) htrA 414285..415514 (-) 1230 WP_000728357.1 S1C family serine protease Regulator
  QN329_RS02465 (QN329_02465) rlmH 415715..416194 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29283.72 Da        Isoelectric Point: 9.6926

>NTDB_id=885365 QN329_RS02455 WP_000456085.1 413414..414187(-) (spo0J) [Streptococcus agalactiae strain HU36/21]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFDNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=885365 QN329_RS02455 WP_000456085.1 413414..414187(-) (spo0J) [Streptococcus agalactiae strain HU36/21]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572