Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QN329_RS02460 Genome accession   NZ_CP135103
Coordinates   414285..415514 (-) Length   409 a.a.
NCBI ID   WP_000728357.1    Uniprot ID   A0AAD2WWM9
Organism   Streptococcus agalactiae strain HU36/21     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 409285..420514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN329_RS02435 (QN329_02435) - 409395..409592 (-) 198 WP_000285199.1 DUF951 domain-containing protein -
  QN329_RS02440 (QN329_02440) - 409602..410495 (-) 894 WP_000987447.1 diacylglycerol/lipid kinase family protein -
  QN329_RS02445 (QN329_02445) dnaN 410553..411689 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  QN329_RS02450 (QN329_02450) dnaA 411844..413205 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  QN329_RS02455 (QN329_02455) spo0J 413414..414187 (-) 774 WP_000456085.1 ParB/RepB/Spo0J family partition protein Regulator
  QN329_RS02460 (QN329_02460) htrA 414285..415514 (-) 1230 WP_000728357.1 S1C family serine protease Regulator
  QN329_RS02465 (QN329_02465) rlmH 415715..416194 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QN329_RS02485 (QN329_02485) - 416774..419353 (-) 2580 WP_371105738.1 YfhO family protein -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 43090.54 Da        Isoelectric Point: 9.5271

>NTDB_id=885366 QN329_RS02460 WP_000728357.1 414285..415514(-) (htrA) [Streptococcus agalactiae strain HU36/21]
MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSD
LSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVK
IPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGA
LINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKL
KIPSNVTNGIVVASIQSGMPAQGKLKKYDVITKVDDKEVASPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSK
DLAKQRANN

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=885366 QN329_RS02460 WP_000728357.1 414285..415514(-) (htrA) [Streptococcus agalactiae strain HU36/21]
GTGAAAAAAAAATTAGTCTCATCACTTCTAAAGTGTTCTCTAATCATTATTGTTAGCTTTGCTGGTGGAGCATTTGCTAG
TTTTGTCATGAATCATAATGACAATATTCCAAATGGTGGTGTCACTAAAACTAGTAAAGTAAATTATAATAACATAACGC
CTACAACAAAAGCTGTTAAAAAGGTACAAAATAGTGTTGTTTCTGTTATCAATTATAAACAACAAGAGAGTCGTTCTGAC
CTATCAGACTTCTATAGTCATTTTTTTGGTAATCAGGGGGGCAACACTGATAAGGGCTTACAAGTTTACGGTGAAGGCTC
TGGAGTCATCTATAAAAAAGATGGTAAAAATGCCTATGTTGTCACTAATAACCACGTCATTGATGGGGCTAAACAAATTG
AAATTCAACTAGCTGATGGCTCAAAAGCAGTTGGGAAACTTGTTGGGTCAGATACCTACTCTGATTTAGCCGTCGTCAAA
ATTCCATCAGATAAGGTTTCAAATATTGCAGAATTTGCTGATTCATCAAAACTCAACATTGGTGAAACTGCTATAGCGAT
CGGAAGCCCTCTTGGAACTGAGTATGCAAATTCTGTAACTCAAGGTATTGTATCTAGTTTAAAAAGAACTGTAACAATGA
CTAATGAAGAAGGACAAACAGTTTCTACAAATGCTATCCAGACTGATGCTGCTATCAATCCTGGTAATTCAGGTGGAGCA
CTTATCAATATTGAAGGACAGGTTATTGGAATTAATTCTAGTAAAATTTCTTCTACATCAAATCAAACCTCAGGACAATC
GTCAGGAAATAGCGTTGAAGGTATGGGATTTGCCATTCCTTCAAATGATGTTGTTAAGATTATCAATCAACTTGAGAGTA
ACGGACAAGTAGAGAGACCTGCTCTAGGTATTTCTATGGCTGGATTAAGTAATTTACCATCCGATGTTATTAGTAAACTG
AAAATCCCAAGTAATGTTACTAATGGTATTGTAGTAGCATCTATCCAATCTGGCATGCCAGCTCAAGGCAAACTAAAGAA
ATACGATGTCATTACTAAAGTTGACGATAAAGAAGTAGCATCTCCAAGTGATTTACAAAGTTTACTCTATGGCCACCAGG
TAGGGGATTCCATAACAGTAACCTTTTATCGTGGTGAAAATAAACAAACAGTAACTATAAAACTTACTAAAACTAGTAAA
GATTTAGCTAAACAACGAGCAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.359

96.088

0.609

  htrA Streptococcus gordonii str. Challis substr. CH1

57.357

98.044

0.562

  htrA Streptococcus mitis NCTC 12261

56.533

97.311

0.55

  htrA Streptococcus pneumoniae TIGR4

55.037

99.511

0.548

  htrA Streptococcus pneumoniae Rx1

55.037

99.511

0.548

  htrA Streptococcus pneumoniae D39

55.037

99.511

0.548

  htrA Streptococcus pneumoniae R6

55.037

99.511

0.548