Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   QN328_RS01655 Genome accession   NZ_CP135102
Coordinates   303148..304182 (+) Length   344 a.a.
NCBI ID   WP_000732712.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain HU32/21     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 298148..309182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN328_RS01615 (QN328_01615) tsaE 298224..298667 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QN328_RS01620 (QN328_01620) - 298660..299181 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  QN328_RS01625 (QN328_01625) brpA 299190..300497 (+) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  QN328_RS01630 (QN328_01630) - 300561..300857 (-) 297 WP_000690175.1 hypothetical protein -
  QN328_RS01635 (QN328_01635) - 300854..301273 (-) 420 WP_000368097.1 HIT family protein -
  QN328_RS01640 (QN328_01640) - 301609..302112 (+) 504 WP_000773453.1 hypothetical protein -
  QN328_RS01645 (QN328_01645) - 302164..302349 (-) 186 WP_000368100.1 hypothetical protein -
  QN328_RS01650 (QN328_01650) pptA 302421..303146 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  QN328_RS01655 (QN328_01655) pptB 303148..304182 (+) 1035 WP_000732712.1 ABC transporter permease Regulator
  QN328_RS01660 (QN328_01660) ccrZ 304240..305040 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  QN328_RS01665 (QN328_01665) trmB 305030..305665 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QN328_RS01675 (QN328_01675) rimP 306157..306633 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  QN328_RS01680 (QN328_01680) nusA 306669..307820 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  QN328_RS01685 (QN328_01685) rnpM 307842..308138 (+) 297 WP_001140526.1 RNase P modulator RnpM -
  QN328_RS01690 (QN328_01690) - 308131..308433 (+) 303 WP_001065560.1 YlxQ-related RNA-binding protein -
  QN328_RS01695 - 308453..308605 (+) 153 Protein_290 translation initiation factor IF-2 N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40218.60 Da        Isoelectric Point: 10.4988

>NTDB_id=885317 QN328_RS01655 WP_000732712.1 303148..304182(+) (pptB) [Streptococcus agalactiae strain HU32/21]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISISVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=885317 QN328_RS01655 WP_000732712.1 303148..304182(+) (pptB) [Streptococcus agalactiae strain HU32/21]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGATAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(147-329)

Bacterial ABC transporter protein EcsB (EcsB)

(2-159)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485
  pptB Streptococcus salivarius strain HSISS4

48.256

100

0.483