Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RPM47_RS04050 Genome accession   NZ_CP135098
Coordinates   857355..857762 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain Paer2090     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 852355..862762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RPM47_RS04030 (RPM47_04030) pilK 853287..854162 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  RPM47_RS04035 (RPM47_04035) pilJ 854223..856271 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  RPM47_RS04040 (RPM47_04040) - 856356..856892 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  RPM47_RS04045 (RPM47_04045) pilH 856943..857308 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  RPM47_RS04050 (RPM47_04050) pilG 857355..857762 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  RPM47_RS04055 (RPM47_04055) gshB 858017..858970 (+) 954 WP_003100943.1 glutathione synthase -
  RPM47_RS04060 (RPM47_04060) - 859117..860010 (+) 894 WP_003084580.1 TonB family protein -
  RPM47_RS04065 (RPM47_04065) - 860059..860628 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  RPM47_RS04070 (RPM47_04070) ruvX 860628..861062 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  RPM47_RS04075 (RPM47_04075) pyrR 861174..861686 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RPM47_RS04080 (RPM47_04080) - 861710..862714 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=885189 RPM47_RS04050 WP_003084583.1 857355..857762(-) (pilG) [Pseudomonas aeruginosa strain Paer2090]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=885189 RPM47_RS04050 WP_003084583.1 857355..857762(-) (pilG) [Pseudomonas aeruginosa strain Paer2090]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385