Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RMQ61_RS10270 Genome accession   NZ_CP135090
Coordinates   2120221..2121480 (-) Length   419 a.a.
NCBI ID   WP_313926331.1    Uniprot ID   -
Organism   Streptococcus suis strain ID48908     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2115221..2126480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ61_RS10250 (RMQ61_10255) dhaL 2116132..2116707 (+) 576 WP_313926328.1 dihydroxyacetone kinase subunit DhaL -
  RMQ61_RS10255 (RMQ61_10260) dhaM 2116704..2117078 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  RMQ61_RS10260 (RMQ61_10265) - 2117088..2117798 (+) 711 WP_313926329.1 MIP/aquaporin family protein -
  RMQ61_RS10265 (RMQ61_10270) - 2118022..2119884 (-) 1863 WP_313926330.1 proline--tRNA ligase -
  RMQ61_RS10270 (RMQ61_10275) eeP 2120221..2121480 (-) 1260 WP_313926331.1 RIP metalloprotease RseP Regulator
  RMQ61_RS10275 (RMQ61_10280) - 2121490..2122296 (-) 807 WP_313926332.1 phosphatidate cytidylyltransferase -
  RMQ61_RS10280 (RMQ61_10285) - 2122306..2123061 (-) 756 WP_044758326.1 isoprenyl transferase -
  RMQ61_RS10285 (RMQ61_10290) yajC 2123175..2123498 (-) 324 WP_105115980.1 preprotein translocase subunit YajC -
  RMQ61_RS10290 (RMQ61_10295) - 2123608..2124900 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44942.10 Da        Isoelectric Point: 4.6960

>NTDB_id=885002 RMQ61_RS10270 WP_313926331.1 2120221..2121480(-) (eeP) [Streptococcus suis strain ID48908]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGNDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDLEEKLEITGLVLEESQTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGVFVFIMLIFAQGGVADPTSNAVSITDGGALQNVGLVTGDKILSVNGQATDTYTDIAT
IISQAASEASTAPSFDLVVEHEGTEKSLTVTAEKVDDSYRIGISPILKTGFLDKIIGGFQQAGATAVIVVTALKNLIANF
DVKQLGGPVAIYSVSNQAAANGWVSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETESYITLAGVA
IMVVLMLVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=885002 RMQ61_RS10270 WP_313926331.1 2120221..2121480(-) (eeP) [Streptococcus suis strain ID48908]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAATGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTAGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCCAGA
CCTATAAGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACTGTCTGGGGGAAGTTGATAACCAACTTTGCTGGTCCCATGAATAACTTTATTTTAGGTGTTTTCGTCTT
TATTATGCTGATTTTTGCGCAAGGGGGGGTTGCAGATCCTACCAGTAATGCCGTTAGTATTACAGACGGTGGTGCCTTAC
AGAATGTAGGTCTGGTGACAGGTGATAAAATCTTGTCGGTCAATGGTCAAGCTACGGATACTTACACAGATATTGCTACA
ATCATTAGTCAGGCAGCCTCAGAAGCCTCTACAGCTCCAAGTTTTGATTTGGTTGTTGAACATGAGGGGACTGAAAAATC
GCTCACAGTTACTGCTGAGAAGGTTGACGATAGCTACCGAATTGGAATTTCACCGATTTTAAAAACTGGTTTCCTTGATA
AGATTATTGGGGGCTTCCAGCAAGCGGGTGCGACAGCAGTTATTGTTGTGACTGCCTTGAAAAACTTGATTGCCAATTTT
GATGTTAAGCAATTGGGTGGACCTGTTGCCATTTATTCTGTCAGCAATCAGGCTGCTGCAAATGGTTGGGTTTCAGTCTT
TAACCTGATGGCTATGCTATCAATCAATATCGGTATTTTCAATCTTATCCCTATTCCAGCCTTGGATGGTGGGAAGATTG
TCATGAACATTCTAGAAGGTATTCGCAGAAAACCACTTAAACCAGAAACAGAATCCTATATCACGCTGGCAGGCGTTGCA
ATCATGGTTGTCCTCATGCTGGTCGTGACCTGGAATGATATTATGCGTGTATTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.286

100

0.644

  eeP Streptococcus thermophilus LMD-9

64.048

100

0.642