Detailed information
Overview
| Name | comF | Type | Machinery gene |
| Locus tag | OCUAc17_RS02090 | Genome accession | NZ_AP024798 |
| Coordinates | 441646..442275 (-) | Length | 209 a.a. |
| NCBI ID | WP_005804600.1 | Uniprot ID | A0A009NMJ1 |
| Organism | Acinetobacter pittii strain OCU Ac17 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 436646..447275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCUAc17_RS02055 (OCUAc17_03950) | mlaE | 436979..437755 (+) | 777 | WP_002117010.1 | lipid asymmetry maintenance ABC transporter permease subunit MlaE | - |
| OCUAc17_RS02060 (OCUAc17_03960) | - | 437755..438435 (+) | 681 | WP_005067241.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| OCUAc17_RS02065 (OCUAc17_03970) | - | 438462..439103 (+) | 642 | WP_002116826.1 | ABC transporter substrate-binding protein | - |
| OCUAc17_RS02070 (OCUAc17_03980) | - | 439115..439402 (+) | 288 | WP_005078357.1 | STAS domain-containing protein | - |
| OCUAc17_RS02075 (OCUAc17_03990) | - | 439475..440488 (-) | 1014 | WP_002116978.1 | magnesium and cobalt transport protein CorA | - |
| OCUAc17_RS02080 (OCUAc17_04000) | - | 440647..441228 (+) | 582 | WP_005804599.1 | TIGR00730 family Rossman fold protein | - |
| OCUAc17_RS02085 (OCUAc17_04010) | mutT | 441243..441644 (+) | 402 | WP_002116701.1 | NUDIX domain-containing protein | - |
| OCUAc17_RS02090 (OCUAc17_04020) | comF | 441646..442275 (-) | 630 | WP_005804600.1 | phosphoribosyltransferase family protein | Machinery gene |
| OCUAc17_RS02095 (OCUAc17_04030) | recG | 442268..444313 (-) | 2046 | WP_005804601.1 | ATP-dependent DNA helicase RecG | - |
| OCUAc17_RS02100 (OCUAc17_04040) | - | 444334..445149 (+) | 816 | WP_005804602.1 | NAD-dependent epimerase/dehydratase family protein | - |
| OCUAc17_RS02105 (OCUAc17_04050) | - | 445229..446212 (+) | 984 | WP_025464186.1 | putative solute-binding protein | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24548.68 Da Isoelectric Point: 9.8063
>NTDB_id=88498 OCUAc17_RS02090 WP_005804600.1 441646..442275(-) (comF) [Acinetobacter pittii strain OCU Ac17]
MFDFLNFKHLIQLFSPCSLCELDTREKYSLCKDCWEQLPWLKQTIQRNNQSVLVACNYAYPVNRIIQQFKYEQKLHYQIL
LGEILKQLKFPKVQAIVPMPISNQRLIERGFNQSLLLANILSRHLKIPVWQPIQRLNEHSQKGLTRLERFENIEQQFLPH
HQEKRRYRRVLIIDDVITTGSSVHALSQALKQLGCTSIHTACLAATPKS
MFDFLNFKHLIQLFSPCSLCELDTREKYSLCKDCWEQLPWLKQTIQRNNQSVLVACNYAYPVNRIIQQFKYEQKLHYQIL
LGEILKQLKFPKVQAIVPMPISNQRLIERGFNQSLLLANILSRHLKIPVWQPIQRLNEHSQKGLTRLERFENIEQQFLPH
HQEKRRYRRVLIIDDVITTGSSVHALSQALKQLGCTSIHTACLAATPKS
Nucleotide
Download Length: 630 bp
>NTDB_id=88498 OCUAc17_RS02090 WP_005804600.1 441646..442275(-) (comF) [Acinetobacter pittii strain OCU Ac17]
ATGTTTGATTTTTTAAACTTCAAGCATCTTATTCAGTTATTTTCACCTTGCTCATTGTGCGAGTTAGACACGCGAGAAAA
ATACTCGCTCTGTAAAGACTGTTGGGAACAGCTACCTTGGCTTAAACAAACGATTCAACGTAATAATCAATCTGTTCTTG
TGGCCTGTAATTATGCTTATCCAGTTAACCGGATTATTCAGCAGTTTAAATATGAACAAAAGTTACATTATCAAATCTTA
TTAGGTGAAATTTTAAAACAATTAAAATTTCCCAAGGTACAAGCTATTGTACCCATGCCTATTTCCAATCAGCGTTTAAT
CGAGCGTGGTTTCAATCAATCATTACTACTTGCCAATATCTTAAGCAGACACTTAAAAATACCTGTTTGGCAACCAATCC
AACGTTTAAACGAGCACTCTCAAAAAGGACTTACTCGGCTAGAACGCTTTGAAAATATAGAACAACAATTTTTACCCCAT
CATCAAGAGAAACGACGTTATCGCCGCGTTCTCATTATTGATGACGTGATAACCACAGGAAGCTCTGTTCATGCGCTCAG
TCAAGCCCTTAAACAATTAGGCTGCACATCCATTCATACGGCGTGCCTAGCAGCGACGCCGAAGAGTTAA
ATGTTTGATTTTTTAAACTTCAAGCATCTTATTCAGTTATTTTCACCTTGCTCATTGTGCGAGTTAGACACGCGAGAAAA
ATACTCGCTCTGTAAAGACTGTTGGGAACAGCTACCTTGGCTTAAACAAACGATTCAACGTAATAATCAATCTGTTCTTG
TGGCCTGTAATTATGCTTATCCAGTTAACCGGATTATTCAGCAGTTTAAATATGAACAAAAGTTACATTATCAAATCTTA
TTAGGTGAAATTTTAAAACAATTAAAATTTCCCAAGGTACAAGCTATTGTACCCATGCCTATTTCCAATCAGCGTTTAAT
CGAGCGTGGTTTCAATCAATCATTACTACTTGCCAATATCTTAAGCAGACACTTAAAAATACCTGTTTGGCAACCAATCC
AACGTTTAAACGAGCACTCTCAAAAAGGACTTACTCGGCTAGAACGCTTTGAAAATATAGAACAACAATTTTTACCCCAT
CATCAAGAGAAACGACGTTATCGCCGCGTTCTCATTATTGATGACGTGATAACCACAGGAAGCTCTGTTCATGCGCTCAG
TCAAGCCCTTAAACAATTAGGCTGCACATCCATTCATACGGCGTGCCTAGCAGCGACGCCGAAGAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comF | Acinetobacter baumannii strain A118 |
83.254 |
100 |
0.833 |
| comF | Acinetobacter baumannii D1279779 |
82.297 |
100 |
0.823 |