Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RMP65_RS09195 Genome accession   NZ_CP135089
Coordinates   1888366..1889625 (-) Length   419 a.a.
NCBI ID   WP_105133990.1    Uniprot ID   -
Organism   Streptococcus suis strain ID34567     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1883366..1894625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMP65_RS09175 (RMP65_09175) dhaL 1884241..1884816 (+) 576 WP_253213489.1 dihydroxyacetone kinase subunit DhaL -
  RMP65_RS09180 (RMP65_09180) dhaM 1884813..1885187 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  RMP65_RS09185 (RMP65_09185) - 1885197..1885907 (+) 711 WP_313681232.1 MIP/aquaporin family protein -
  RMP65_RS09190 (RMP65_09190) - 1885986..1887848 (-) 1863 WP_313912502.1 proline--tRNA ligase -
  RMP65_RS09195 (RMP65_09195) eeP 1888366..1889625 (-) 1260 WP_105133990.1 RIP metalloprotease RseP Regulator
  RMP65_RS09200 (RMP65_09200) - 1889635..1890441 (-) 807 WP_105115981.1 phosphatidate cytidylyltransferase -
  RMP65_RS09205 (RMP65_09205) - 1890451..1891206 (-) 756 WP_013730586.1 isoprenyl transferase -
  RMP65_RS09210 (RMP65_09210) yajC 1891320..1891643 (-) 324 WP_105115980.1 preprotein translocase subunit YajC -
  RMP65_RS09215 (RMP65_09215) - 1891753..1893045 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44873.26 Da        Isoelectric Point: 5.9847

>NTDB_id=884950 RMP65_RS09195 WP_105133990.1 1888366..1889625(-) (eeP) [Streptococcus suis strain ID34567]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNATDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKKRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=884950 RMP65_RS09195 WP_105133990.1 1888366..1889625(-) (eeP) [Streptococcus suis strain ID34567]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACGGGTAAGGATGGGACAC
TTTACACCATCCGTATTCTTCCTCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCATGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCAGGTCCCATGAATAACTTTATTCTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACGCGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTAGTTGAGCATGATGGGAAAAAACGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATCTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTGACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654