Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | OCUAc17_RS01705 | Genome accession | NZ_AP024798 |
| Coordinates | 361466..361939 (+) | Length | 157 a.a. |
| NCBI ID | WP_005804545.1 | Uniprot ID | A0A009N256 |
| Organism | Acinetobacter pittii strain OCU Ac17 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 356466..366939
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCUAc17_RS01680 (OCUAc17_03200) | spoT | 356928..359033 (-) | 2106 | WP_002116807.1 | HD domain-containing protein | - |
| OCUAc17_RS01685 | - | 359049..359171 (-) | 123 | Protein_324 | hypothetical protein | - |
| OCUAc17_RS01690 (OCUAc17_03210) | rpoZ | 359243..359521 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| OCUAc17_RS01695 (OCUAc17_03220) | gmk | 359594..360223 (-) | 630 | WP_005804544.1 | guanylate kinase | - |
| OCUAc17_RS01700 (OCUAc17_03230) | ispH | 360346..361296 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| OCUAc17_RS01705 (OCUAc17_03240) | fimU | 361466..361939 (+) | 474 | WP_005804545.1 | GspH/FimT family pseudopilin | Machinery gene |
| OCUAc17_RS01710 (OCUAc17_03250) | pilV | 361933..362493 (+) | 561 | WP_078210318.1 | type IV pilus modification protein PilV | Machinery gene |
| OCUAc17_RS01715 (OCUAc17_03260) | pilW | 362493..363494 (+) | 1002 | WP_005804547.1 | PilW family protein | Machinery gene |
| OCUAc17_RS01720 (OCUAc17_03270) | pilX | 363491..364300 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16912.60 Da Isoelectric Point: 7.7942
>NTDB_id=88491 OCUAc17_RS01705 WP_005804545.1 361466..361939(+) (fimU) [Acinetobacter pittii strain OCU Ac17]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTILSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTILSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=88491 OCUAc17_RS01705 WP_005804545.1 361466..361939(+) (fimU) [Acinetobacter pittii strain OCU Ac17]
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAATCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAACTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTAATAACCAATATCACCCAAGACACAATTTTATCTATCTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAATCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAACTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTAATAACCAATATCACCCAAGACACAATTTTATCTATCTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
87.898 |
100 |
0.879 |