Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RMQ62_RS06940 Genome accession   NZ_CP135065
Coordinates   1420706..1421965 (+) Length   419 a.a.
NCBI ID   WP_105133990.1    Uniprot ID   -
Organism   Streptococcus suis strain ID24665     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1415706..1426965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ62_RS06920 (RMQ62_06920) - 1417286..1418578 (+) 1293 WP_002937782.1 adenylosuccinate synthase -
  RMQ62_RS06925 (RMQ62_06925) yajC 1418688..1419011 (+) 324 WP_105115980.1 preprotein translocase subunit YajC -
  RMQ62_RS06930 (RMQ62_06930) - 1419125..1419880 (+) 756 WP_013730586.1 isoprenyl transferase -
  RMQ62_RS06935 (RMQ62_06935) - 1419890..1420696 (+) 807 WP_105115981.1 phosphatidate cytidylyltransferase -
  RMQ62_RS06940 (RMQ62_06940) eeP 1420706..1421965 (+) 1260 WP_105133990.1 RIP metalloprotease RseP Regulator
  RMQ62_RS06945 (RMQ62_06945) - 1422483..1424345 (+) 1863 WP_044752058.1 proline--tRNA ligase -
  RMQ62_RS06950 (RMQ62_06950) - 1424424..1425134 (-) 711 WP_313681232.1 MIP/aquaporin family protein -
  RMQ62_RS06955 (RMQ62_06955) dhaM 1425144..1425518 (-) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  RMQ62_RS06960 (RMQ62_06960) dhaL 1425515..1426090 (-) 576 WP_253213489.1 dihydroxyacetone kinase subunit DhaL -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44873.26 Da        Isoelectric Point: 5.9847

>NTDB_id=884738 RMQ62_RS06940 WP_105133990.1 1420706..1421965(+) (eeP) [Streptococcus suis strain ID24665]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNATDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKKRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=884738 RMQ62_RS06940 WP_105133990.1 1420706..1421965(+) (eeP) [Streptococcus suis strain ID24665]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACGGGTAAGGATGGGACAC
TTTACACCATCCGTATTCTTCCTCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCATGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCAGGTCCCATGAATAACTTTATTCTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACGCGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTGGTTGAGCATGATGGGAAAAAACGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATCTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTGACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654