Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RMQ63_RS04570 Genome accession   NZ_CP135063
Coordinates   962139..963398 (-) Length   419 a.a.
NCBI ID   WP_105133990.1    Uniprot ID   -
Organism   Streptococcus suis strain ID32563     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 957139..968398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ63_RS04550 (RMQ63_04550) dhaL 958014..958589 (+) 576 WP_253213489.1 dihydroxyacetone kinase subunit DhaL -
  RMQ63_RS04555 (RMQ63_04555) dhaM 958586..958960 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  RMQ63_RS04560 (RMQ63_04560) - 958970..959680 (+) 711 WP_313681232.1 MIP/aquaporin family protein -
  RMQ63_RS04565 (RMQ63_04565) - 959759..961621 (-) 1863 WP_044752058.1 proline--tRNA ligase -
  RMQ63_RS04570 (RMQ63_04570) eeP 962139..963398 (-) 1260 WP_105133990.1 RIP metalloprotease RseP Regulator
  RMQ63_RS04575 (RMQ63_04575) - 963408..964214 (-) 807 WP_105115981.1 phosphatidate cytidylyltransferase -
  RMQ63_RS04580 (RMQ63_04580) - 964224..964979 (-) 756 WP_013730586.1 isoprenyl transferase -
  RMQ63_RS04585 (RMQ63_04585) yajC 965093..965416 (-) 324 WP_105115980.1 preprotein translocase subunit YajC -
  RMQ63_RS04590 (RMQ63_04590) - 965526..966818 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44873.26 Da        Isoelectric Point: 5.9847

>NTDB_id=884672 RMQ63_RS04570 WP_105133990.1 962139..963398(-) (eeP) [Streptococcus suis strain ID32563]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNATDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKKRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=884672 RMQ63_RS04570 WP_105133990.1 962139..963398(-) (eeP) [Streptococcus suis strain ID32563]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACGGGTAAGGATGGGACAC
TTTACACCATCCGTATTCTTCCTCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCATGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCAGGTCCCATGAATAACTTTATTCTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACGCGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTAGTTGAGCATGATGGGAAAAAACGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATCTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTGACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654