Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | M9H33_RS06220 | Genome accession | NZ_CP134828 |
| Coordinates | 1291887..1292861 (+) | Length | 324 a.a. |
| NCBI ID | WP_023350200.1 | Uniprot ID | - |
| Organism | Staphylococcus capitis strain ADJWO | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1286887..1297861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9H33_RS06185 (M9H33_06185) | rpmG | 1287400..1287549 (+) | 150 | WP_002433802.1 | 50S ribosomal protein L33 | - |
| M9H33_RS06190 (M9H33_06190) | - | 1287698..1288249 (+) | 552 | WP_030063896.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| M9H33_RS06195 (M9H33_06195) | - | 1288250..1289713 (+) | 1464 | WP_023350197.1 | rhomboid family intramembrane serine protease | - |
| M9H33_RS06200 (M9H33_06200) | - | 1289694..1289897 (+) | 204 | WP_002433937.1 | YqgQ family protein | - |
| M9H33_RS06205 (M9H33_06205) | - | 1289894..1290880 (+) | 987 | WP_023350198.1 | ROK family glucokinase | - |
| M9H33_RS06210 (M9H33_06210) | - | 1290880..1291206 (+) | 327 | WP_002433945.1 | MTH1187 family thiamine-binding protein | - |
| M9H33_RS06215 (M9H33_06215) | - | 1291206..1291829 (+) | 624 | WP_049399400.1 | MBL fold metallo-hydrolase | - |
| M9H33_RS06220 (M9H33_06220) | comGA | 1291887..1292861 (+) | 975 | WP_023350200.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M9H33_RS06225 (M9H33_06225) | comGB | 1292833..1293900 (+) | 1068 | WP_023350201.1 | competence type IV pilus assembly protein ComGB | - |
| M9H33_RS06230 (M9H33_06230) | comGC | 1293919..1294230 (+) | 312 | WP_029625707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M9H33_RS06235 (M9H33_06235) | comGD | 1294208..1294657 (+) | 450 | WP_023350202.1 | competence type IV pilus minor pilin ComGD | - |
| M9H33_RS06240 (M9H33_06240) | - | 1294644..1294943 (+) | 300 | WP_023350203.1 | hypothetical protein | - |
| M9H33_RS06245 (M9H33_06245) | comGF | 1294861..1295352 (+) | 492 | WP_037560565.1 | competence type IV pilus minor pilin ComGF | - |
| M9H33_RS06250 (M9H33_06250) | - | 1295522..1296031 (+) | 510 | WP_029625706.1 | shikimate kinase | - |
| M9H33_RS06255 (M9H33_06255) | gcvT | 1296240..1297331 (+) | 1092 | WP_023350205.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37044.84 Da Isoelectric Point: 7.7305
>NTDB_id=883937 M9H33_RS06220 WP_023350200.1 1291887..1292861(+) (comGA) [Staphylococcus capitis strain ADJWO]
MKILFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
MKILFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=883937 M9H33_RS06220 WP_023350200.1 1291887..1292861(+) (comGA) [Staphylococcus capitis strain ADJWO]
ATGAAAATATTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAGGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
ATGAAAATATTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAGGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.898 |
99.691 |
0.707 |
| comGA | Staphylococcus aureus N315 |
70.898 |
99.691 |
0.707 |