Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   RNT94_RS02420 Genome accession   NZ_CP134803
Coordinates   488803..489789 (+) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus strain SA85_2     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 483803..494789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNT94_RS02400 - 484171..485793 (+) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -
  RNT94_RS02405 trpS 485913..486902 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  RNT94_RS02410 spxA 487197..487592 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  RNT94_RS02415 mecA 487963..488682 (+) 720 WP_001217731.1 adaptor protein MecA -
  RNT94_RS02420 coiA 488803..489789 (+) 987 WP_000959279.1 competence protein CoiA Machinery gene
  RNT94_RS02425 pepF 489837..491645 (+) 1809 WP_000082727.1 oligoendopeptidase F -
  RNT94_RS02430 yjbH 492105..492911 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  RNT94_RS02435 - 492934..493299 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  RNT94_RS02440 - 493403..493996 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  RNT94_RS02445 - 494182..494529 (+) 348 WP_001242104.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=883803 RNT94_RS02420 WP_000959279.1 488803..489789(+) (coiA) [Staphylococcus aureus strain SA85_2]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=883803 RNT94_RS02420 WP_000959279.1 488803..489789(+) (coiA) [Staphylococcus aureus strain SA85_2]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96