Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   RI132_RS07155 Genome accession   NZ_CP134783
Coordinates   1562616..1564109 (-) Length   497 a.a.
NCBI ID   WP_011080506.1    Uniprot ID   Q7ML00
Organism   Vibrio vulnificus strain GCU-01     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1557616..1569109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RI132_RS07140 (RI132_07140) - 1559014..1560192 (-) 1179 WP_130191062.1 glycosyltransferase family 4 protein -
  RI132_RS07145 (RI132_07145) - 1560189..1561382 (-) 1194 WP_130191061.1 glycosyltransferase -
  RI132_RS07150 (RI132_07150) - 1561490..1562623 (-) 1134 WP_130191060.1 glycosyltransferase -
  RI132_RS07155 (RI132_07155) luxO 1562616..1564109 (-) 1494 WP_011080506.1 sigma-54 dependent transcriptional regulator Regulator
  RI132_RS07160 (RI132_07160) - 1564266..1566554 (-) 2289 WP_011150241.1 ATP-binding protein -
  RI132_RS07165 (RI132_07165) - 1566578..1567396 (-) 819 WP_011150242.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  RI132_RS07170 (RI132_07170) - 1567393..1568085 (-) 693 WP_043877164.1 tyrosine-protein kinase family protein -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 55750.79 Da        Isoelectric Point: 6.5960

>NTDB_id=883726 RI132_RS07155 WP_011080506.1 1562616..1564109(-) (luxO) [Vibrio vulnificus strain GCU-01]
MRAKVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERNTPQLVILDLKLPDMSGEDVLDWINQNDIPTAVIIA
TAHGSVDIAVSLMNKGAEDFLEKPIKADRLKTSIAVHLKRAKLEHLVENMQSRFDRPRYHGFIGACLPMQAVYKTIDSVA
PTTASVFINGESGTGKEVCAEAIHKQSLRKEQPFIAINCGAIPRDLMESEIFGHLKGAFTGATTDRKGAAMLANGGTLFL
DELCEMELEMQKKLLRFLQTGTFTPLGGSKEVKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIEMPPLRERGNDI
VELANHFLKTYAKEDGKKFNSISKEAQSILKKYNWPGNVRQLQNIIRNIVVLNDDNQLNVEHLPAQLTTKPQTVKEPAKL
STPPQPAQAVIHEMHNGHEALNHHSLETQTSKANPLTHNAFHHSDGSIRPMWQIEREAIQNAIAFCDGNVISAAVMLELS
PSTVYRKKQAWEAEENA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=883726 RI132_RS07155 WP_011080506.1 1562616..1564109(-) (luxO) [Vibrio vulnificus strain GCU-01]
ATGCGAGCAAAAGTACTGTTAGTCGAGGATTCCACTTCACTTGCCATTTTATATAAGCAATACGTCAAAGATGAGCCCTA
TGACATTTTTCACGTAGAAACCGGACGTGACGCGATTCAGTTTATTGAGCGCAATACGCCTCAACTGGTGATTTTAGATC
TCAAGTTGCCCGATATGTCCGGGGAAGATGTGCTCGACTGGATCAACCAAAACGATATTCCGACCGCGGTTATCATCGCC
ACCGCTCATGGTTCCGTTGACATCGCCGTCAGCTTAATGAACAAAGGGGCGGAAGATTTTCTCGAAAAGCCAATCAAAGC
CGACCGTTTGAAAACATCCATTGCCGTTCATCTAAAACGCGCCAAGTTAGAGCATTTGGTTGAGAACATGCAATCTCGCT
TCGACAGGCCACGTTATCATGGCTTTATCGGCGCGTGCCTGCCAATGCAGGCCGTTTATAAAACCATTGATTCCGTGGCA
CCAACCACCGCCAGTGTTTTTATCAACGGAGAGAGTGGCACAGGGAAAGAAGTGTGTGCTGAAGCGATCCACAAACAGAG
CCTACGCAAAGAGCAGCCCTTTATCGCAATCAACTGTGGGGCGATTCCTCGTGACTTAATGGAAAGCGAAATCTTTGGTC
ACTTAAAAGGGGCGTTTACTGGAGCGACAACCGACCGCAAAGGTGCGGCAATGCTGGCCAACGGCGGCACGTTGTTTCTC
GATGAATTGTGCGAAATGGAACTGGAGATGCAGAAAAAACTGCTGCGTTTTCTTCAGACTGGTACCTTCACCCCACTCGG
CGGCAGTAAAGAAGTCAAGGTGGATGTGCGCATCATCTGCGCCACCAATCGCGATCCCCTCAAAGAGGTCGAAGAAGGCC
GTTTTAGGGAAGATCTCTACTATCGTGTCCATGTGGTTCCCATTGAAATGCCGCCACTTAGAGAACGAGGTAATGACATT
GTTGAGCTGGCCAATCACTTCCTCAAAACTTACGCCAAAGAAGACGGCAAAAAATTCAACTCAATCAGCAAAGAAGCTCA
ATCAATACTCAAAAAATACAACTGGCCGGGCAATGTTCGTCAGTTGCAAAACATCATTCGCAACATTGTCGTTCTCAACG
ATGACAACCAACTGAATGTGGAACATTTGCCGGCTCAGCTCACCACCAAACCGCAAACCGTCAAAGAACCCGCTAAACTC
TCAACCCCACCTCAACCTGCTCAAGCGGTCATACACGAGATGCACAACGGACATGAGGCGTTAAACCATCATTCGCTTGA
GACGCAAACATCCAAGGCCAATCCACTCACCCACAATGCGTTCCACCATTCTGACGGCAGTATCCGTCCAATGTGGCAAA
TCGAACGCGAAGCGATTCAAAACGCCATCGCCTTTTGCGACGGCAACGTGATCAGTGCGGCGGTGATGTTGGAGCTAAGC
CCTTCGACGGTGTATCGCAAAAAACAAGCGTGGGAGGCAGAAGAAAATGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-114)

Bacterial regulatory protein, Fis family (HTH_8)

(451-487)

Sigma-54 interaction domain (Sigma54_activat)

(144-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q7ML00

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

50.823

97.787

0.497
  pilR Acinetobacter baumannii strain A118

37.014

98.39

0.364