Detailed information NTG0883594

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RNI18_RS13745
• Genome accession: NZ_CP134775
• Coordinates: 2760972..2762135 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain KB21
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2755972..2767135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RNI18_RS13725 (RNI18_13725)	-	2756389..2757585 (+)	1197	WP_079004918.1	glycosyltransferase	-
RNI18_RS13730 (RNI18_13730)	-	2757718..2758794 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
RNI18_RS13735 (RNI18_13735)	-	2758884..2760098 (-)	1215	WP_003151383.1	LCP family protein	-
RNI18_RS13740 (RNI18_13740)	-	2760103..2760750 (-)	648	WP_003151384.1	YigZ family protein	-
RNI18_RS13745 (RNI18_13745)	degS	2760972..2762135 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
RNI18_RS13750 (RNI18_13750)	degU	2762212..2762901 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RNI18_RS13755 (RNI18_13755)	-	2762999..2763847 (+)	849	WP_044052857.1	DegV family protein	-
RNI18_RS13760 (RNI18_13760)	comFA	2763955..2765340 (+)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
RNI18_RS13765 (RNI18_13765)	-	2765398..2765682 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
RNI18_RS13770 (RNI18_13770)	comFC	2765688..2766377 (+)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
RNI18_RS13775 (RNI18_13775)	-	2766451..2766870 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=883594 RNI18_RS13745 WP_003151385.1 2760972..2762135(+) (degS) [Bacillus velezensis strain KB21]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=883594 RNI18_RS13745 WP_003151385.1 2760972..2762135(+) (degS) [Bacillus velezensis strain KB21]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948