Detailed information NTG0883345

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: AACG34_RS24850
• Genome accession: NZ_CP151071
• Coordinates: 5038129..5039538 (+)
• Length: 469 a.a.
• NCBI ID: WP_001315107.1
• Uniprot ID: A0A0H2Z4V2
• Organism: Escherichia coli strain 22KM0354
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 5033129..5044538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACG34_RS24835	typA	5033289..5035112 (-)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-
AACG34_RS24840	glnA	5035485..5036894 (+)	1410	WP_001271717.1	glutamate--ammonia ligase	-
AACG34_RS24845	glnL	5037068..5038117 (+)	1050	WP_000190574.1	nitrogen regulation protein NR(II)	-
AACG34_RS24850	luxO	5038129..5039538 (+)	1410	WP_001315107.1	nitrogen regulation protein NR(I)	Regulator
AACG34_RS24855	yshB	5039650..5039760 (+)	111	WP_000893994.1	YshB family small membrane protein	-
AACG34_RS24860	hemN	5039993..5041366 (-)	1374	WP_000116094.1	oxygen-independent coproporphyrinogen III oxidase	-
AACG34_RS24865	yihI	5041555..5042064 (-)	510	WP_001305065.1	Der GTPase-activating protein YihI	-
AACG34_RS24870	-	5042183..5042349 (-)	167	Protein_4873	hypothetical protein	-
AACG34_RS24875	yihA	5042646..5043278 (+)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52302.79 Da
• Isoelectric Point: 6.5091

>NTDB_id=883345 AACG34_RS24850 WP_001315107.1 5038129..5039538(+) (luxO) [Escherichia coli strain 22KM0354]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESNVPESTSHMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=883345 AACG34_RS24850 WP_001315107.1 5038129..5039538(+) (luxO) [Escherichia coli strain 22KM0354]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCGATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCATTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTGGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGTGAAGCGCCAGCCATGCAGGACGTGTTCCGGATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
AGCCAAAGCGCCGTTTATCGCGCTCAATATGGCGGCTATCCCGAAGGATTTGATCGAATCCGAACTGTTTGGTCACGAGA
AAGGCGCATTTACCGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCTGATGGCGGTACATTATTTCTTGATGAA
ATTGGCGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTATCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTAGATGTGCGGATTATCGCTGCCACTCACCAGAATCTTGAACAGCGGGTGCAGGAAGGCAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTCATCCGCGTTCATCTGCCGCCACTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCACGCCATTTTTTACAGGTTGCCGCGCGAGAGCTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCCGC
GCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGTCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCTGGCGAACTGTTTGAATCAAACGTACCGGAAAGCACTTCACACATGCAGCCGGAC
AGTTGGGCAACGCTGTTAGCACAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAACCTGCTTTCCGAAGCACAGCC
AGAGCTGGAACGGACGTTACTGACCACCGCGCTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTTGGCT
GGGGTCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A0H2Z4V2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.655	98.934	0.392
pilR	Pseudomonas aeruginosa PAK	38.854	100	0.39