Detailed information NTG0882899

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RJY17_RS13145
• Genome accession: NZ_CP134692
• Coordinates: 2549869..2551017 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2544869..2556017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJY17_RS13125 (RJY17_13125)	-	2545269..2545952 (-)	684	WP_094032071.1	ABC transporter ATP-binding protein	-
RJY17_RS13130 (RJY17_13130)	-	2545967..2547403 (-)	1437	WP_094032072.1	ABC transporter permease	-
RJY17_RS13135 (RJY17_13135)	-	2547616..2548299 (+)	684	WP_007410267.1	response regulator transcription factor	-
RJY17_RS13140 (RJY17_13140)	-	2548286..2549707 (+)	1422	WP_195182934.1	HAMP domain-containing sensor histidine kinase	-
RJY17_RS13145 (RJY17_13145)	rapC	2549869..2551017 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
RJY17_RS13150 (RJY17_13150)	phrC	2551001..2551120 (+)	120	WP_064115825.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
RJY17_RS13155 (RJY17_13155)	-	2551269..2551379 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
RJY17_RS13160 (RJY17_13160)	-	2551459..2552823 (-)	1365	WP_199022338.1	aspartate kinase	-
RJY17_RS13165 (RJY17_13165)	ceuB	2553237..2554190 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
RJY17_RS13170 (RJY17_13170)	-	2554180..2555127 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
RJY17_RS13175 (RJY17_13175)	-	2555121..2555879 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=882899 RJY17_RS13145 WP_007410270.1 2549869..2551017(+) (rapC) [Bacillus velezensis strain B5]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=882899 RJY17_RS13145 WP_007410270.1 2549869..2551017(+) (rapC) [Bacillus velezensis strain B5]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568