Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   RL452_RS12980 Genome accession   NZ_CP134620
Coordinates   2606837..2607724 (-) Length   295 a.a.
NCBI ID   WP_000143421.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sa9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2601837..2612724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RL452_RS12950 (RL452_12940) - 2601856..2601948 (+) 93 WP_010956583.1 hypothetical protein -
  RL452_RS12955 (RL452_12945) - 2602056..2602553 (-) 498 WP_001065267.1 glutathione peroxidase -
  RL452_RS12960 (RL452_12950) - 2602563..2602823 (-) 261 WP_078104073.1 hypothetical protein -
  RL452_RS12965 (RL452_12955) - 2603205..2603318 (-) 114 WP_078062686.1 hypothetical protein -
  RL452_RS12970 (RL452_12960) - 2603977..2605977 (-) 2001 WP_338595881.1 ABC transporter permease -
  RL452_RS12975 (RL452_12965) - 2605974..2606729 (-) 756 WP_000923773.1 ABC transporter ATP-binding protein -
  RL452_RS12980 (RL452_12970) braS 2606837..2607724 (-) 888 WP_000143421.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RL452_RS12985 (RL452_12975) braR 2607735..2608400 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RL452_RS12990 (RL452_12980) - 2608426..2608626 (-) 201 WP_000604725.1 hypothetical protein -
  RL452_RS12995 (RL452_12985) - 2608824..2610248 (+) 1425 WP_000953751.1 alkaline phosphatase -
  RL452_RS13000 (RL452_12990) - 2610318..2610428 (+) 111 WP_001791296.1 hypothetical protein -
  RL452_RS13005 (RL452_12995) - 2610531..2610986 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RL452_RS13010 (RL452_13000) - 2611231..2611992 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34075.34 Da        Isoelectric Point: 5.8962

>NTDB_id=882459 RL452_RS12980 WP_000143421.1 2606837..2607724(-) (braS) [Staphylococcus aureus strain Sa9]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNESTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=882459 RL452_RS12980 WP_000143421.1 2606837..2607724(-) (braS) [Staphylococcus aureus strain Sa9]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGACAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGAGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99