Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   RL452_RS04755 Genome accession   NZ_CP134620
Coordinates   979768..980337 (-) Length   189 a.a.
NCBI ID   WP_000283455.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sa9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 974768..985337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RL452_RS04735 (RL452_04730) - 976265..977623 (+) 1359 WP_000021871.1 TrkH family potassium uptake protein -
  RL452_RS04740 (RL452_04735) - 977762..979273 (+) 1512 WP_000414188.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  RL452_RS04755 (RL452_04750) comK/comK1 979768..980337 (-) 570 WP_000283455.1 competence protein ComK Regulator
  RL452_RS04760 (RL452_04755) - 980547..980765 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  RL452_RS04765 (RL452_04760) - 980846..981832 (-) 987 WP_000668820.1 lipoate--protein ligase -
  RL452_RS04770 (RL452_04765) - 982031..982207 (+) 177 WP_000214898.1 YkvS family protein -
  RL452_RS04775 (RL452_04770) - 982222..982824 (+) 603 WP_001033867.1 CPBP family glutamic-type intramembrane protease -
  RL452_RS04780 (RL452_04775) - 983741..983842 (+) 102 WP_338597113.1 hypothetical protein -
  RL452_RS04785 (RL452_04780) - 983852..984124 (+) 273 WP_078062708.1 lactococcin 972 family bacteriocin -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22567.83 Da        Isoelectric Point: 9.5152

>NTDB_id=882433 RL452_RS04755 WP_000283455.1 979768..980337(-) (comK/comK1) [Staphylococcus aureus strain Sa9]
MYPQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKSETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSCHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=882433 RL452_RS04755 WP_000283455.1 979768..980337(-) (comK/comK1) [Staphylococcus aureus strain Sa9]
ATGTATCCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGCGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAATCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACTCATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATGCCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

98.413

100

0.984
  comK/comK1 Staphylococcus aureus N315

98.413

100

0.984