Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | RL451_RS02340 | Genome accession | NZ_CP134617 |
| Coordinates | 434454..435428 (+) | Length | 324 a.a. |
| NCBI ID | WP_331385828.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain IPLA16 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 429454..440428
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL451_RS02305 (RL451_02305) | rpmG | 429914..430063 (+) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
| RL451_RS02310 (RL451_02310) | - | 430272..430811 (+) | 540 | WP_000164546.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| RL451_RS02315 (RL451_02315) | - | 430823..432286 (+) | 1464 | WP_001017867.1 | rhomboid family protein | - |
| RL451_RS02320 (RL451_02320) | - | 432267..432470 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RL451_RS02325 (RL451_02325) | - | 432467..433453 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RL451_RS02330 (RL451_02330) | - | 433453..433782 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RL451_RS02335 (RL451_02335) | - | 433779..434402 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RL451_RS02340 (RL451_02340) | comGA | 434454..435428 (+) | 975 | WP_331385828.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RL451_RS02345 (RL451_02345) | comGB | 435400..436470 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RL451_RS02350 (RL451_02350) | comGC | 436484..436795 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RL451_RS02355 (RL451_02355) | comGD | 436773..437219 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RL451_RS02360 (RL451_02360) | comGE | 437206..437505 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RL451_RS02365 (RL451_02365) | comGF | 437423..437920 (+) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RL451_RS02370 (RL451_02370) | - | 438017..438163 (+) | 147 | WP_072399793.1 | hypothetical protein | - |
| RL451_RS02375 (RL451_02375) | - | 438153..438677 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| RL451_RS02380 (RL451_02380) | gcvT | 438836..439927 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36826.88 Da Isoelectric Point: 8.6530
>NTDB_id=882347 RL451_RS02340 WP_331385828.1 434454..435428(+) (comGA) [Staphylococcus aureus strain IPLA16]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFIINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLALTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFIINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLALTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=882347 RL451_RS02340 WP_331385828.1 434454..435428(+) (comGA) [Staphylococcus aureus strain IPLA16]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTATAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGGCCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGCTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTATAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGGCCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGCTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.383 |
100 |
0.994 |
| comGA | Staphylococcus aureus N315 |
99.383 |
100 |
0.994 |