Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   OCX51_RS08320 Genome accession   NZ_AP024742
Coordinates   1701468..1702154 (-) Length   228 a.a.
NCBI ID   WP_001793467.1    Uniprot ID   A0A641AAY3
Organism   Staphylococcus aureus strain 59736     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1696468..1707154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCX51_RS08300 rpsT 1697382..1697633 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  OCX51_RS08305 holA 1697678..1698652 (-) 975 WP_001282568.1 DNA polymerase III subunit delta -
  OCX51_RS08310 comEC 1698709..1700910 (-) 2202 WP_172576660.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  OCX51_RS08315 - 1700915..1701376 (-) 462 WP_000439693.1 ComE operon protein 2 -
  OCX51_RS08320 comEA 1701468..1702154 (-) 687 WP_001793467.1 ComEA family DNA-binding protein Machinery gene
  OCX51_RS08325 - 1702194..1702910 (-) 717 WP_000084829.1 class I SAM-dependent DNA methyltransferase -
  OCX51_RS08330 rsfS 1702913..1703266 (-) 354 WP_001088022.1 ribosome silencing factor -
  OCX51_RS08335 yqeK 1703267..1703851 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  OCX51_RS08340 nadD 1703841..1704410 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  OCX51_RS08345 yhbY 1704413..1704703 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  OCX51_RS08350 aroE 1704707..1705513 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  OCX51_RS08355 yqeH 1705527..1706627 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25786.50 Da        Isoelectric Point: 9.6753

>NTDB_id=88086 OCX51_RS08320 WP_001793467.1 1701468..1702154(-) (comEA) [Staphylococcus aureus strain 59736]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDNALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=88086 OCX51_RS08320 WP_001793467.1 1701468..1702154(-) (comEA) [Staphylococcus aureus strain 59736]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATAATG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641AAY3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

100

100

1
  comEA Staphylococcus aureus N315

97.368

100

0.974

Multiple sequence alignment