Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   RKV28_RS05095 Genome accession   NZ_CP134534
Coordinates   1030212..1031198 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain KNIH_5618     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1025212..1036198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKV28_RS05070 opp4B 1025426..1026388 (+) 963 WP_000915997.1 oligopeptide ABC transporter permease -
  RKV28_RS05075 opp4C 1026400..1027281 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  RKV28_RS05080 trpS 1027323..1028312 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  RKV28_RS05085 spxA 1028606..1029001 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  RKV28_RS05090 mecA 1029372..1030091 (+) 720 WP_001217728.1 adaptor protein MecA -
  RKV28_RS05095 coiA 1030212..1031198 (+) 987 WP_000959282.1 competence protein CoiA Machinery gene
  RKV28_RS05100 pepF 1031246..1033054 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  RKV28_RS05105 yjbH 1033514..1034320 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  RKV28_RS05110 - 1034343..1034708 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  RKV28_RS05115 - 1034812..1035405 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  RKV28_RS05120 - 1035591..1035938 (+) 348 WP_001242103.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=880779 RKV28_RS05095 WP_000959282.1 1030212..1031198(+) (coiA) [Staphylococcus aureus strain KNIH_5618]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=880779 RKV28_RS05095 WP_000959282.1 1030212..1031198(+) (coiA) [Staphylococcus aureus strain KNIH_5618]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976