Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RHP75_RS19110 Genome accession   NZ_CP134499
Coordinates   4045820..4046227 (-) Length   135 a.a.
NCBI ID   WP_160012893.1    Uniprot ID   -
Organism   Pseudomonas sp. SG20056     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4040820..4051227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RHP75_RS19090 (RHP75_19090) - 4041769..4042626 (-) 858 WP_311089584.1 protein-glutamate O-methyltransferase -
  RHP75_RS19095 (RHP75_19095) - 4042695..4044740 (-) 2046 WP_311089585.1 methyl-accepting chemotaxis protein -
  RHP75_RS19100 (RHP75_19100) - 4044825..4045361 (-) 537 WP_269379756.1 chemotaxis protein CheW -
  RHP75_RS19105 (RHP75_19105) pilH 4045407..4045772 (-) 366 WP_108485952.1 twitching motility response regulator PilH -
  RHP75_RS19110 (RHP75_19110) pilG 4045820..4046227 (-) 408 WP_160012893.1 twitching motility response regulator PilG Regulator
  RHP75_RS19115 (RHP75_19115) gshB 4046468..4047430 (+) 963 WP_311089586.1 glutathione synthase -
  RHP75_RS19120 (RHP75_19120) - 4047487..4048383 (+) 897 WP_311089587.1 energy transducer TonB -
  RHP75_RS19125 (RHP75_19125) - 4048435..4049004 (+) 570 WP_311089588.1 YqgE/AlgH family protein -
  RHP75_RS19130 (RHP75_19130) ruvX 4049004..4049441 (+) 438 WP_233683404.1 Holliday junction resolvase RuvX -
  RHP75_RS19135 (RHP75_19135) pyrR 4049464..4049970 (+) 507 WP_311089589.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RHP75_RS19140 (RHP75_19140) - 4049981..4050991 (+) 1011 WP_311089590.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14838.23 Da        Isoelectric Point: 6.7128

>NTDB_id=880584 RHP75_RS19110 WP_160012893.1 4045820..4046227(-) (pilG) [Pseudomonas sp. SG20056]
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=880584 RHP75_RS19110 WP_160012893.1 4045820..4046227(-) (pilG) [Pseudomonas sp. SG20056]
ATGGAACAGCATTCCGAGGGTTTGAGGGTGATGGTGATCGACGATTCGAAAACGATTCGTCGTACCGCGGAAACCCTGCT
GAAAAAGGTGGGCTGCGAGGTAATTACTGCAGTTGACGGCTTCGATGCTTTGGCAAAGATCGCCGATACCCATCCGAACA
TCATCTTTGTCGACATTATGATGCCGCGGCTCGATGGCTATCAGACCTGTGCCTTGATCAAGAACAACAGCGCTTTCAAA
TCCACTCCGGTGATCATGCTGTCTTCCAAAGACGGTCTGTTCGATAAAGCTAAGGGTCGCATTGTCGGTTCCGATCAATA
CCTGACCAAACCCTTCAGTAAAGAAGAGCTGCTCGGTGCGATTAAAGCCCATGTGCCTGACTTTGTACCGGTGGAACAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

41.27

93.333

0.385