Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   RHP70_RS05285 Genome accession   NZ_CP134496
Coordinates   1086989..1087939 (+) Length   316 a.a.
NCBI ID   WP_056766093.1    Uniprot ID   -
Organism   Bacillus sp. SG20001     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1081989..1092939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RHP70_RS05255 (RHP70_05255) - 1083453..1084313 (+) 861 WP_197202935.1 SDR family oxidoreductase -
  RHP70_RS05260 (RHP70_05260) - 1084370..1084606 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  RHP70_RS05265 (RHP70_05265) comK 1084896..1085474 (+) 579 WP_024425481.1 competence protein ComK Regulator
  RHP70_RS05270 (RHP70_05270) - 1085774..1086256 (+) 483 WP_024425482.1 hypothetical protein -
  RHP70_RS05275 (RHP70_05275) - 1086288..1086440 (-) 153 Protein_981 PLP-dependent aminotransferase family protein -
  RHP70_RS05280 (RHP70_05280) - 1086549..1086827 (+) 279 WP_171464240.1 barstar family protein -
  RHP70_RS05285 (RHP70_05285) ceuB 1086989..1087939 (+) 951 WP_056766093.1 ABC transporter permease Machinery gene
  RHP70_RS05290 (RHP70_05290) - 1087932..1088882 (+) 951 WP_171464128.1 iron chelate uptake ABC transporter family permease subunit -
  RHP70_RS05295 (RHP70_05295) - 1088873..1089631 (+) 759 WP_024425488.1 ABC transporter ATP-binding protein -
  RHP70_RS05300 (RHP70_05300) - 1089653..1090597 (+) 945 WP_034621816.1 siderophore ABC transporter substrate-binding protein -
  RHP70_RS05305 (RHP70_05305) - 1090736..1091689 (+) 954 WP_197172758.1 LCP family protein -
  RHP70_RS05310 (RHP70_05310) - 1091761..1092123 (-) 363 WP_024425491.1 hypothetical protein -
  RHP70_RS05315 (RHP70_05315) - 1092281..1092898 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34930.33 Da        Isoelectric Point: 9.7476

>NTDB_id=880473 RHP70_RS05285 WP_056766093.1 1086989..1087939(+) (ceuB) [Bacillus sp. SG20001]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKGLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=880473 RHP70_RS05285 WP_056766093.1 1086989..1087939(+) (ceuB) [Bacillus sp. SG20001]
ATGAAATTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGTGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAGGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTATATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.163

95.253

0.487