Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RJW49_RS09230 Genome accession   NZ_CP134477
Coordinates   1826128..1827387 (-) Length   419 a.a.
NCBI ID   WP_014736438.1    Uniprot ID   -
Organism   Streptococcus suis strain NLS40     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1821128..1832387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJW49_RS09205 (RJW49_09205) dhaK 1821242..1822231 (+) 990 WP_014736433.1 dihydroxyacetone kinase subunit DhaK -
  RJW49_RS09210 (RJW49_09210) dhaL 1822242..1822817 (+) 576 WP_014736434.1 dihydroxyacetone kinase subunit DhaL -
  RJW49_RS09215 (RJW49_09215) dhaM 1822814..1823188 (+) 375 WP_014736435.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  RJW49_RS09220 (RJW49_09220) - 1823198..1823908 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  RJW49_RS09225 (RJW49_09225) - 1823988..1825850 (-) 1863 WP_024405304.1 proline--tRNA ligase -
  RJW49_RS09230 (RJW49_09230) eeP 1826128..1827387 (-) 1260 WP_014736438.1 RIP metalloprotease Regulator
  RJW49_RS09235 (RJW49_09235) - 1827397..1828203 (-) 807 WP_074393577.1 phosphatidate cytidylyltransferase -
  RJW49_RS09240 (RJW49_09240) - 1828213..1828968 (-) 756 WP_013730586.1 isoprenyl transferase -
  RJW49_RS09245 (RJW49_09245) yajC 1829082..1829405 (-) 324 WP_014736441.1 preprotein translocase subunit YajC -
  RJW49_RS09250 (RJW49_09250) - 1829668..1830960 (-) 1293 WP_014736442.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44891.18 Da        Isoelectric Point: 5.6974

>NTDB_id=880233 RJW49_RS09230 WP_014736438.1 1826128..1827387(-) (eeP) [Streptococcus suis strain NLS40]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGTYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLASVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=880233 RJW49_RS09230 WP_014736438.1 1826128..1827387(-) (eeP) [Streptococcus suis strain NLS40]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGACGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGACCTATCGAATAGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGAGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAGTTTGGTTTGGCCTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65

100

0.652

  eeP Streptococcus thermophilus LMG 18311

65

100

0.652