Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RJW55_RS09865 Genome accession   NZ_CP134473
Coordinates   2100082..2101341 (-) Length   419 a.a.
NCBI ID   WP_023371637.1    Uniprot ID   A0A0Z8F6A2
Organism   Streptococcus suis strain TMW_SS028     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2095082..2106341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJW55_RS09840 (RJW55_09840) dhaS 2095105..2095650 (-) 546 WP_043027217.1 dihydroxyacetone kinase transcriptional activator DhaS -
  RJW55_RS09845 (RJW55_09845) dhaK 2095796..2096785 (+) 990 WP_043027218.1 dihydroxyacetone kinase subunit DhaK -
  RJW55_RS09850 (RJW55_09850) dhaL 2096796..2097371 (+) 576 WP_043027219.1 dihydroxyacetone kinase subunit DhaL -
  RJW55_RS09855 (RJW55_09855) dhaM 2097368..2097742 (+) 375 WP_029175094.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  RJW55_RS09860 (RJW55_09860) - 2097788..2099641 (-) 1854 WP_043027220.1 proline--tRNA ligase -
  RJW55_RS09865 (RJW55_09865) eeP 2100082..2101341 (-) 1260 WP_023371637.1 RIP metalloprotease RseP Regulator
  RJW55_RS09870 (RJW55_09870) - 2101351..2102157 (-) 807 WP_043027221.1 phosphatidate cytidylyltransferase -
  RJW55_RS09875 (RJW55_09875) - 2102167..2102922 (-) 756 WP_029175090.1 isoprenyl transferase -
  RJW55_RS09880 (RJW55_09880) - 2103154..2103746 (+) 593 Protein_1918 transposase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=880181 RJW55_RS09865 WP_023371637.1 2100082..2101341(-) (eeP) [Streptococcus suis strain TMW_SS028]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=880181 RJW55_RS09865 WP_023371637.1 2100082..2101341(-) (eeP) [Streptococcus suis strain TMW_SS028]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGAACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTATCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGGACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGTGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGATAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCCGAACAAGTAGATGGGGCTTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTGTT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TGATGAATATCCTAGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8F6A2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654