Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   RIU93_RS11155 Genome accession   NZ_CP134464
Coordinates   2240176..2241072 (-) Length   298 a.a.
NCBI ID   WP_047211220.1    Uniprot ID   -
Organism   Staphylococcus warneri strain 2023.05     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2235176..2246072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIU93_RS11140 (RIU93_11140) - 2236004..2237191 (-) 1188 WP_232013276.1 DUF4064 domain-containing protein -
  RIU93_RS11145 (RIU93_11145) - 2237314..2239308 (-) 1995 WP_232013275.1 ABC transporter permease -
  RIU93_RS11150 (RIU93_11150) - 2239326..2240072 (-) 747 WP_049414576.1 ABC transporter ATP-binding protein -
  RIU93_RS11155 (RIU93_11155) braS 2240176..2241072 (-) 897 WP_047211220.1 HAMP domain-containing sensor histidine kinase Regulator
  RIU93_RS11160 (RIU93_11160) braR 2241078..2241743 (-) 666 WP_047211221.1 response regulator transcription factor Regulator
  RIU93_RS11165 (RIU93_11165) - 2241765..2241923 (-) 159 WP_002467360.1 hypothetical protein -
  RIU93_RS11170 (RIU93_11170) - 2242180..2243634 (+) 1455 WP_049414579.1 alkaline phosphatase -
  RIU93_RS11175 (RIU93_11175) - 2243717..2243818 (-) 102 WP_015364644.1 SE2200 family small protein -
  RIU93_RS11180 (RIU93_11180) - 2243999..2245462 (-) 1464 WP_213463753.1 poly-gamma-glutamate hydrolase family protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34357.74 Da        Isoelectric Point: 5.6517

>NTDB_id=880076 RIU93_RS11155 WP_047211220.1 2240176..2241072(-) (braS) [Staphylococcus warneri strain 2023.05]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPQSALMLGVAIILFIMCIYWWISYLGFQKQEKLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVANQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVNIDDL
IKPLIMKYRIHFIEQHTKIHYQSNDDSILTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLSIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSDLNKGTQFTISFPTQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=880076 RIU93_RS11155 WP_047211220.1 2240176..2241072(-) (braS) [Staphylococcus warneri strain 2023.05]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACGTTTATATCCTTACTGTTTGTACTCATTTT
CTTTGTGTTTTCACTCCCCCAAAGTGCGCTAATGCTTGGTGTAGCAATTATTTTATTTATTATGTGCATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAACAAGAAAAACTTAAAGAAAAAGTAGTATCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAACAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACATGGGTACATCAAATCAAAACGCCAATCACTGC
ATCGCAACTATTGCTAGAACGTAATGAACCTAATGTTGCCAATCAAGTGAGACAAGAAATTGTACAAATTGATAACTATA
CTCGTTTAGCACTAAGTTACTTAAAATTACTTAATGAAGCCTCGGATATGACAATCACAGAGGTGAACATAGATGATTTA
ATTAAACCTTTAATTATGAAATATCGAATTCACTTTATTGAACAACATACTAAAATTCATTATCAATCTAATGATGATAG
TATCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTGAATAACGCATTAAAATATGCACGTGGAAAAG
ATATTTGGATTGACTTTGACTCAACGTCTCAACAATTATCTATTAAAGATAACGGGATTGGTATTAGTCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTTAATGAATCCTCAAGCGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTAACATCAGACTTGAATAAAGGTACACAATTTACAATTAGCT
TTCCAACGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.356

98.993

0.607