Detailed information NTG0879588

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: RJD39_RS04200
• Genome accession: NZ_CP134277
• Coordinates: 886725..888194 (-)
• Length: 489 a.a.
• NCBI ID: WP_406733334.1
• Uniprot ID: -
• Organism: Vibrio scophthalmi strain 21FBVib0096
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 881725..893194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD39_RS04185 (RJD39_04185)	-	883143..884333 (-)	1191	WP_406733328.1	glycosyltransferase family 4 protein	-
RJD39_RS04190 (RJD39_04190)	-	884343..885557 (-)	1215	WP_406733330.1	glycosyltransferase	-
RJD39_RS04195 (RJD39_04195)	-	885680..886747 (-)	1068	WP_406733332.1	glycosyltransferase family 4 protein	-
RJD39_RS04200 (RJD39_04200)	luxO	886725..888194 (-)	1470	WP_406733334.1	sigma-54-dependent transcriptional regulator	Regulator
RJD39_RS04205 (RJD39_04205)	-	888230..890533 (-)	2304	WP_406733336.1	response regulator	-
RJD39_RS04210 (RJD39_04210)	-	890554..891246 (-)	693	WP_406733338.1	chromosome partitioning protein ParA	-

Sequence

Protein

• Length: 489 a.a.
• Molecular weight: 54887.71 Da
• Isoelectric Point: 5.9703

>NTDB_id=879588 RJD39_RS04200 WP_406733334.1 886725..888194(-) (luxO) [Vibrio scophthalmi strain 21FBVib0096]
MKSKVLLIEDSTSLAVLYQQYVKDEPFDLFHVETGREAIAFIERNVPQLVILDLKLPDMDGQDILDWIVENQVPTSVIVA
TAHGSVDVAVNLLQKGAKDFIEKPIKADRLKTSINLHLQRAKLEDLVENIESKFDRQRFHGFIGSSLPMQGVYKIIDSVA
PTTASVFIIGESGTGKEVCAEAIHKESKRRDKPFIAINCGAIPKDLMESEIFGHLKGAFTGATTDRKGAATAANGGTMFL
DELCEMDLEMQKKLLRFLQTGTFTPLGANKEQKVDVRIICATNRDPLVEVEEGRFREDLYYRVHVVPIEMPPLRERGGDI
VTLATHFLKLYAKQDQKKFRTINKDAEAILKRYAWPGNVRQLQNILRNIVVLNNDERLAVEHLPAQVVQLRKAANVTRTA
SVDNHPSPAAQEHIVNETNHTATSQSESSNVSESTIRPMWQIEREAIQQAIELCDGNVLNAAVLLELSPSTVYRKKQAWE
TEDEQNFVQ

Nucleotide

• Length: 1470 bp

>NTDB_id=879588 RJD39_RS04200 WP_406733334.1 886725..888194(-) (luxO) [Vibrio scophthalmi strain 21FBVib0096]
ATGAAATCAAAAGTACTTTTAATCGAAGATTCGACCTCACTGGCAGTGTTGTATCAGCAGTATGTCAAAGACGAGCCTTT
TGACCTTTTTCACGTTGAAACCGGCCGTGAAGCGATCGCATTTATTGAGCGCAACGTCCCTCAGTTGGTGATCCTTGATC
TCAAGTTACCTGATATGGATGGCCAAGACATTCTCGACTGGATTGTTGAAAATCAAGTGCCAACGTCTGTGATTGTCGCG
ACCGCACACGGTTCGGTTGATGTTGCCGTCAACTTGCTACAGAAAGGCGCTAAAGATTTTATAGAAAAACCAATCAAAGC
CGACCGTTTGAAAACATCGATTAATCTGCACCTTCAACGTGCCAAACTCGAAGATTTGGTTGAAAACATTGAGAGCAAAT
TTGATCGCCAACGCTTCCATGGTTTTATTGGTAGTAGCCTACCGATGCAAGGTGTTTACAAAATAATCGATTCTGTTGCC
CCAACCACCGCCAGCGTGTTTATTATCGGCGAAAGTGGTACCGGTAAAGAAGTGTGCGCTGAAGCGATTCATAAAGAGAG
TAAACGCCGTGATAAGCCGTTTATCGCAATCAACTGTGGCGCAATTCCTAAAGACTTGATGGAAAGTGAGATTTTTGGTC
ATCTAAAAGGGGCATTTACCGGTGCAACAACCGATAGAAAAGGTGCAGCGACAGCAGCCAATGGCGGCACGATGTTCCTT
GATGAGCTGTGTGAAATGGACTTGGAAATGCAGAAAAAATTGCTGCGTTTTCTCCAAACAGGCACGTTCACTCCTCTAGG
TGCCAACAAGGAACAAAAGGTTGATGTTCGCATTATTTGTGCAACCAACCGCGATCCTCTAGTGGAGGTTGAAGAAGGAC
GATTTAGAGAAGATTTATATTACCGCGTACATGTTGTGCCGATTGAAATGCCCCCACTACGCGAGCGCGGTGGTGACATT
GTGACACTTGCCACCCATTTTCTAAAACTGTACGCGAAGCAAGACCAGAAAAAATTCCGCACTATCAATAAAGACGCAGA
AGCGATCTTAAAACGTTACGCATGGCCAGGTAACGTGCGTCAATTACAGAACATACTGCGTAATATCGTCGTGCTCAATA
ACGATGAGCGTTTAGCGGTGGAGCATTTACCAGCACAAGTGGTGCAATTACGAAAAGCCGCCAACGTAACGCGAACGGCC
AGTGTCGATAATCACCCTTCCCCTGCCGCTCAGGAGCATATTGTGAATGAAACGAATCACACCGCCACGTCACAAAGCGA
GAGTTCCAATGTCAGTGAGTCGACCATTCGCCCTATGTGGCAGATTGAACGTGAAGCCATTCAGCAAGCGATTGAACTGT
GTGATGGCAACGTGCTCAATGCAGCAGTGCTACTCGAACTGAGCCCTTCTACGGTTTACCGTAAAAAACAGGCTTGGGAA
ACAGAAGATGAACAAAACTTCGTCCAATGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Bacterial regulatory protein, Fis family (HTH_8) (439-475)

• Sigma-54 interaction domain (Sigma54_activat) (143-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	51.266	96.933	0.497
pilR	Acinetobacter baumannii strain A118	37.014	100	0.37