Detailed information NTG0879577

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: RJD38_RS13725
• Genome accession: NZ_CP134271
• Coordinates: 3014103..3015572 (-)
• Length: 489 a.a.
• NCBI ID: WP_065545323.1
• Uniprot ID: -
• Organism: Vibrio scophthalmi strain 20FBVib0200
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 3009103..3020572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD38_RS13710 (RJD38_13705)	-	3010521..3011711 (-)	1191	WP_065545325.1	glycosyltransferase family 4 protein	-
RJD38_RS13715 (RJD38_13710)	-	3011721..3012935 (-)	1215	WP_005599145.1	glycosyltransferase	-
RJD38_RS13720 (RJD38_13715)	-	3013058..3014125 (-)	1068	WP_065545324.1	glycosyltransferase family 4 protein	-
RJD38_RS13725 (RJD38_13720)	luxO	3014103..3015572 (-)	1470	WP_065545323.1	sigma-54-dependent transcriptional regulator	Regulator
RJD38_RS13730 (RJD38_13725)	-	3015608..3017911 (-)	2304	WP_065545322.1	response regulator	-
RJD38_RS13735 (RJD38_13730)	-	3017932..3018624 (-)	693	WP_005599138.1	hypothetical protein	-

Sequence

Protein

• Length: 489 a.a.
• Molecular weight: 54876.68 Da
• Isoelectric Point: 5.9703

>NTDB_id=879577 RJD38_RS13725 WP_065545323.1 3014103..3015572(-) (luxO) [Vibrio scophthalmi strain 20FBVib0200]
MKSKVLLIEDSTSLAVLYQQYVKDEPFDLFHVETGREAIAFIERNVPQLVILDLKLPDMDGQDILDWIVENQVPTSVIVA
TAHGSVDVAVNLLQKGAKDFIEKPIKADRLKTSINLHLQRAKLEDLVENIESKFDRQRFHGFIGSSLPMQGVYKIIDSVA
PTTASVFIIGESGTGKEVCAEAIHKESKRRDKPFIAINCGAIPKDLMESEIFGHLKGAFTGATTDRKGAATAANGGTMFL
DELCEMDLEMQKKLLRFLQTGTFTPLGANKEQKVDVRIICATNRDPLVEVEEGRFREDLYYRVHVVPIEMPPLRERGGDI
ATLATHFLKLYAKQDQKKFRTINKDAEAILKRYAWPGNVRQLQNILRNIVVLNNDERLAVEHLPTQVVQLRKAASVTRTA
SIDNHPSPAAQEHIVNETNHTATSQSESSNVSESTIRPMWQIEREAIQQAIELCDGNVLNAAVLLELSPSTVYRKKQAWE
TEDEQNFVQ

Nucleotide

• Length: 1470 bp

>NTDB_id=879577 RJD38_RS13725 WP_065545323.1 3014103..3015572(-) (luxO) [Vibrio scophthalmi strain 20FBVib0200]
ATGAAATCAAAAGTACTTTTAATCGAAGATTCGACCTCACTGGCAGTGTTGTATCAGCAGTATGTCAAAGACGAGCCTTT
TGACCTTTTTCACGTTGAAACAGGCCGTGAAGCGATCGCATTTATTGAGCGCAACGTCCCTCAGTTGGTGATCCTTGATC
TCAAGTTACCTGATATGGATGGCCAAGACATTCTCGACTGGATTGTTGAAAATCAAGTGCCAACGTCTGTGATTGTCGCG
ACCGCGCACGGTTCGGTTGATGTTGCCGTCAACTTGCTACAGAAAGGCGCTAAAGATTTTATAGAAAAACCAATCAAAGC
CGACCGTTTGAAAACATCGATTAATCTGCACCTTCAACGTGCCAAACTCGAAGATTTGGTTGAAAACATTGAGAGCAAAT
TTGATCGCCAACGCTTCCATGGTTTTATTGGTAGTAGCCTACCGATGCAAGGTGTTTATAAAATAATCGACTCTGTAGCC
CCAACCACCGCCAGCGTGTTTATTATCGGCGAAAGTGGTACCGGTAAAGAAGTGTGCGCTGAAGCGATTCATAAAGAGAG
TAAGCGCCGTGATAAGCCGTTTATCGCAATCAACTGTGGCGCAATTCCTAAAGACTTGATGGAAAGTGAGATTTTTGGTC
ATCTAAAAGGGGCATTTACCGGTGCAACAACCGATAGAAAAGGTGCAGCGACAGCAGCCAATGGCGGCACGATGTTCCTT
GATGAACTATGCGAAATGGACTTGGAAATGCAGAAAAAATTGCTGCGTTTTCTCCAAACAGGCACGTTCACTCCTCTGGG
TGCCAACAAGGAACAAAAGGTTGATGTTCGCATTATTTGTGCGACCAACCGCGATCCTCTAGTGGAGGTTGAAGAAGGCC
GATTTAGAGAAGATTTATATTACCGCGTACATGTTGTGCCGATTGAAATGCCCCCACTACGCGAGCGCGGTGGTGACATT
GCCACGCTTGCCACCCATTTTCTAAAACTGTACGCGAAGCAAGACCAGAAAAAATTCCGCACTATCAATAAAGACGCAGA
AGCGATCTTAAAACGTTACGCATGGCCAGGTAACGTGCGTCAATTACAGAACATACTGCGTAATATTGTCGTGCTCAATA
ACGATGAGCGTTTAGCGGTGGAGCACTTACCGACACAAGTGGTGCAATTACGAAAAGCTGCCAGCGTAACGCGAACGGCC
AGTATCGATAATCACCCTTCCCCTGCCGCTCAAGAGCATATTGTGAATGAAACGAATCACACCGCCACGTCACAAAGCGA
GAGTTCCAATGTCAGTGAGTCGACCATTCGCCCTATGTGGCAGATTGAACGTGAAGCCATTCAGCAAGCGATTGAACTGT
GTGATGGCAACGTGCTCAATGCAGCAGTACTACTCGAACTGAGCCCTTCTACGGTTTACCGTAAAAAACAGGCTTGGGAA
ACAGAAGATGAACAAAACTTCGTCCAATGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (439-475)

• Sigma-54 interaction domain (Sigma54_activat) (143-309)

• Response regulator receiver domain (Response_reg) (5-114)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	51.477	96.933	0.499
pilR	Acinetobacter baumannii strain A118	37.295	99.796	0.372