Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   RG879_RS09525 Genome accession   NZ_CP134202
Coordinates   1874214..1875473 (-) Length   419 a.a.
NCBI ID   WP_058143231.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain Alim_agalac_1000     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1869214..1880473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RG879_RS09515 - 1871560..1872144 (-) 585 WP_000842267.1 glycoside hydrolase family 73 protein -
  RG879_RS09520 - 1872269..1874122 (-) 1854 WP_029140674.1 proline--tRNA ligase -
  RG879_RS09525 eeP 1874214..1875473 (-) 1260 WP_058143231.1 RIP metalloprotease RseP Regulator
  RG879_RS09530 - 1875504..1876298 (-) 795 WP_000664688.1 phosphatidate cytidylyltransferase -
  RG879_RS09535 - 1876313..1877065 (-) 753 WP_000469560.1 isoprenyl transferase -
  RG879_RS09540 yajC 1877232..1877573 (-) 342 WP_000056607.1 preprotein translocase subunit YajC -
  RG879_RS09545 - 1877650..1877994 (-) 345 WP_000286792.1 thioredoxin domain-containing protein -
  RG879_RS09550 - 1878185..1879348 (-) 1164 WP_001293705.1 NADP-dependent malic enzyme -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 46054.07 Da        Isoelectric Point: 10.0874

>NTDB_id=879308 RG879_RS09525 WP_058143231.1 1874214..1875473(-) (eeP) [Streptococcus agalactiae strain Alim_agalac_1000]
MLGILTFIIIFGVIVVVHESGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEIRIAPLDVQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTRHLEKKQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGFKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYITLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=879308 RG879_RS09525 WP_058143231.1 1874214..1875473(-) (eeP) [Streptococcus agalactiae strain Alim_agalac_1000]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATCTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAGCCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATCAATGTCACAGCTTATGATCTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTATAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAATTCGTATTGCTCCCTTAGATGTGCAGTAT
CAGAATGCTTCTGTATGGGGGCGCTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGAGGTGTTCAAGATTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCTG
CTAGTGCAGGTTTAAAAAATAATGATCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGGCATTTAGAAAAAAAACAAAAACTTGCCCTTAAGATTAAGAGCAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTCTAAAGACAAGCTTTAAAGACA
AACTTTTAGGTGGATTTAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCAGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCCATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTACGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTAACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(205-271)

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.286

100

0.695
  eeP Streptococcus thermophilus LMD-9

69.048

100

0.692