Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RGB74_RS19495 | Genome accession | NZ_CP134049 |
| Coordinates | 3817153..3819573 (-) | Length | 806 a.a. |
| NCBI ID | WP_310760870.1 | Uniprot ID | - |
| Organism | Bacillus sp. NEB1478 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3812153..3824573
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGB74_RS19475 (RGB74_19475) | ispD | 3812591..3813286 (-) | 696 | WP_310760866.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| RGB74_RS19480 (RGB74_19480) | - | 3813306..3814397 (-) | 1092 | WP_310760867.1 | PIN/TRAM domain-containing protein | - |
| RGB74_RS19485 (RGB74_19485) | disA | 3814472..3815545 (-) | 1074 | WP_310760868.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| RGB74_RS19490 (RGB74_19490) | radA | 3815551..3816924 (-) | 1374 | WP_310760869.1 | DNA repair protein RadA | Machinery gene |
| RGB74_RS19495 (RGB74_19495) | clpC | 3817153..3819573 (-) | 2421 | WP_310760870.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| RGB74_RS19500 (RGB74_19500) | - | 3819588..3820658 (-) | 1071 | WP_310760871.1 | protein arginine kinase | - |
| RGB74_RS19505 (RGB74_19505) | - | 3820662..3821195 (-) | 534 | WP_310760872.1 | UvrB/UvrC motif-containing protein | - |
| RGB74_RS19510 (RGB74_19510) | - | 3821232..3821699 (-) | 468 | WP_310760873.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 806 a.a. Molecular weight: 89906.48 Da Isoelectric Point: 5.9770
>NTDB_id=878390 RGB74_RS19495 WP_310760870.1 3817153..3819573(-) (clpC) [Bacillus sp. NEB1478]
MMFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALQVLGLGPEKIQKEVETLIGRGQEAVQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSSSHRGSSASANT
PTLDSLARDLTAIARDGSLDPVIGRAKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKYIEKDAALERRFQPITVNEPTKDESIQILQGLRDRYEAHHRVTITDDAIEASVQLSDRYISDRFLPDKAIDLIDEAAS
KVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREELEKTKDVWKEKQGKENTEVTPEDIAQVV
SSWTGVPVSKLAEEETERLLKMEEILHDRVIGQAEAVTAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAE
TLFGDEDAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLT
DSKGRTVDFRNTVVIMTSNVGASTLKRNRSLGFAVNDLNQKYNDMKTKVMDELKRAFRPEFLNRIDEIIVFHSLEKEHLL
KIVSLMSDALKKRLSDQGIDIELTQAALEKITEEGYDPDYGARPLRRALQRKIEDRLSEELLRGNINKGQTVKIDVEQND
FVVETV
MMFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALQVLGLGPEKIQKEVETLIGRGQEAVQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSSSHRGSSASANT
PTLDSLARDLTAIARDGSLDPVIGRAKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKYIEKDAALERRFQPITVNEPTKDESIQILQGLRDRYEAHHRVTITDDAIEASVQLSDRYISDRFLPDKAIDLIDEAAS
KVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREELEKTKDVWKEKQGKENTEVTPEDIAQVV
SSWTGVPVSKLAEEETERLLKMEEILHDRVIGQAEAVTAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAE
TLFGDEDAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLT
DSKGRTVDFRNTVVIMTSNVGASTLKRNRSLGFAVNDLNQKYNDMKTKVMDELKRAFRPEFLNRIDEIIVFHSLEKEHLL
KIVSLMSDALKKRLSDQGIDIELTQAALEKITEEGYDPDYGARPLRRALQRKIEDRLSEELLRGNINKGQTVKIDVEQND
FVVETV
Nucleotide
Download Length: 2421 bp
>NTDB_id=878390 RGB74_RS19495 WP_310760870.1 3817153..3819573(-) (clpC) [Bacillus sp. NEB1478]
ATGATGTTTGGTCGTTTTACAGAACGTGCTCAAAAAGTATTGGCATTAGCGCAGGAAGAAGCAATTCGGTTAGGCCATAA
CAACGTGGGAACAGAACACATCTTATTAGGATTGATCAGGGAAGGCGAAGGGATTGCTGCCAAAGCGCTTCAAGTCTTAG
GATTAGGACCTGAAAAGATTCAAAAGGAAGTGGAAACGCTAATCGGACGTGGACAGGAAGCTGTTCAGACGATTCATTAT
ACACCAAGGGCTAAGAAAGTTATTGAACTTTCCATGGATGAAGCTCGTAAGCTAGGACATTCCTATGTTGGAACAGAGCA
TATTTTATTAGGGCTCATTCGTGAGGGTGAAGGAGTTGCAGCTCGAGTATTGAATAATCTTGGCGTAAGCTTGAACAAAG
CTCGCCAGCAGGTTCTTCAGCTGCTAGGAAGCAATGAATCTTCTTCCAGCCACCGTGGTTCATCTGCTAGTGCGAATACT
CCGACATTAGACAGCCTTGCAAGAGATCTAACGGCAATTGCGCGTGATGGTTCATTGGATCCAGTAATCGGCCGTGCTAA
AGAAATTCAGCGTGTAATCGAAGTGCTTAGCCGCCGTACGAAAAATAATCCGGTTTTAATCGGTGAGCCAGGCGTAGGTA
AAACAGCGATAGCAGAAGGGTTGGCACAGCAGATTATCAACAACGAAGTTCCTGAAACACTTCGCGATAAGCGAGTTATG
ACACTAGATATGGGAACGGTAGTTGCGGGTACAAAATATAGAGGTGAATTCGAAGACCGTCTGAAAAAAGTGATGGATGA
AATTCGCCAGGCTGGTAATATTATTCTTTTCATTGATGAACTTCATACATTGATCGGTGCAGGTGGAGCAGAAGGTGCGA
TCGATGCCTCTAATATTTTAAAACCAGCATTGGCTCGCGGAGAACTTCAATGTATCGGTGCGACAACACTTGATGAATAC
AGAAAATATATCGAAAAAGATGCAGCGTTAGAGCGCCGTTTCCAGCCGATCACTGTAAATGAACCAACAAAGGATGAAAG
TATTCAAATCCTGCAAGGTCTTCGCGATCGATATGAAGCTCACCATCGCGTAACAATTACTGACGATGCAATCGAAGCAT
CTGTCCAATTATCAGACCGCTATATTTCAGACCGGTTCCTGCCGGATAAAGCGATCGATTTAATTGATGAAGCAGCTTCA
AAAGTACGTCTTCGTTCATATACAGCTCCGCCAAACTTGAAGGAACTGGAGCAGAAACTGGAAGAAGTCCGCAAAGAAAA
AGACGCAGCTGTTCAAAGCCAGGAGTTTGAAAAAGCCGCATCACTGCGCGATTCTGAACAGCGTTTACGTGAGGAACTGG
AAAAAACAAAAGATGTTTGGAAAGAGAAACAAGGAAAAGAAAATACAGAAGTTACACCGGAAGATATCGCACAAGTGGTG
TCATCTTGGACGGGAGTTCCTGTTTCAAAGCTAGCTGAAGAGGAAACAGAACGTCTGTTGAAAATGGAAGAAATTCTTCA
TGACCGTGTGATCGGTCAGGCTGAAGCTGTTACGGCAATTTCGAAAGCGATCCGCCGAGCTCGCGCAGGTTTGAAAGATC
CGAAACGTCCGATTGGTTCCTTTATTTTCTTAGGACCAACAGGTGTTGGTAAAACAGAACTTGCAAGAGCAGTAGCTGAA
ACATTGTTCGGTGATGAAGACGCGATTATCCGTATCGATATGTCCGAGTACATGGAGAAGCATACGACTTCCCGCTTAGT
AGGTTCGCCTCCAGGTTATGTTGGCCACGAAGAAGGCGGCCAGTTAACGGAAAAAGTAAGAAGAAAACCGTATTCCGTTA
TTTTGCTCGACGAGATTGAAAAAGCGCATCCAGAAGTATTCAACATCCTGCTTCAAGTGCTTGAAGATGGTCGTTTGACT
GATTCTAAAGGGCGTACAGTCGATTTCAGAAACACGGTTGTTATCATGACATCAAACGTTGGTGCGAGCACGCTCAAACG
TAACCGTTCATTAGGATTTGCAGTAAATGATCTAAACCAAAAATACAATGATATGAAAACAAAGGTAATGGATGAGCTTA
AGAGAGCTTTCCGTCCTGAGTTCCTTAACCGTATTGACGAGATTATCGTGTTCCACTCTCTTGAAAAAGAACATCTTCTC
AAGATTGTCAGCTTAATGTCTGACGCATTGAAAAAACGCTTAAGCGATCAAGGAATCGATATTGAATTAACGCAGGCAGC
GTTAGAGAAGATTACGGAAGAAGGATATGATCCAGACTACGGAGCACGGCCGCTTCGTAGAGCACTTCAGCGAAAAATTG
AAGACCGTCTATCAGAAGAGCTGCTTAGAGGAAACATCAATAAGGGTCAAACCGTTAAAATTGATGTAGAGCAGAATGAT
TTTGTAGTAGAAACGGTGTAA
ATGATGTTTGGTCGTTTTACAGAACGTGCTCAAAAAGTATTGGCATTAGCGCAGGAAGAAGCAATTCGGTTAGGCCATAA
CAACGTGGGAACAGAACACATCTTATTAGGATTGATCAGGGAAGGCGAAGGGATTGCTGCCAAAGCGCTTCAAGTCTTAG
GATTAGGACCTGAAAAGATTCAAAAGGAAGTGGAAACGCTAATCGGACGTGGACAGGAAGCTGTTCAGACGATTCATTAT
ACACCAAGGGCTAAGAAAGTTATTGAACTTTCCATGGATGAAGCTCGTAAGCTAGGACATTCCTATGTTGGAACAGAGCA
TATTTTATTAGGGCTCATTCGTGAGGGTGAAGGAGTTGCAGCTCGAGTATTGAATAATCTTGGCGTAAGCTTGAACAAAG
CTCGCCAGCAGGTTCTTCAGCTGCTAGGAAGCAATGAATCTTCTTCCAGCCACCGTGGTTCATCTGCTAGTGCGAATACT
CCGACATTAGACAGCCTTGCAAGAGATCTAACGGCAATTGCGCGTGATGGTTCATTGGATCCAGTAATCGGCCGTGCTAA
AGAAATTCAGCGTGTAATCGAAGTGCTTAGCCGCCGTACGAAAAATAATCCGGTTTTAATCGGTGAGCCAGGCGTAGGTA
AAACAGCGATAGCAGAAGGGTTGGCACAGCAGATTATCAACAACGAAGTTCCTGAAACACTTCGCGATAAGCGAGTTATG
ACACTAGATATGGGAACGGTAGTTGCGGGTACAAAATATAGAGGTGAATTCGAAGACCGTCTGAAAAAAGTGATGGATGA
AATTCGCCAGGCTGGTAATATTATTCTTTTCATTGATGAACTTCATACATTGATCGGTGCAGGTGGAGCAGAAGGTGCGA
TCGATGCCTCTAATATTTTAAAACCAGCATTGGCTCGCGGAGAACTTCAATGTATCGGTGCGACAACACTTGATGAATAC
AGAAAATATATCGAAAAAGATGCAGCGTTAGAGCGCCGTTTCCAGCCGATCACTGTAAATGAACCAACAAAGGATGAAAG
TATTCAAATCCTGCAAGGTCTTCGCGATCGATATGAAGCTCACCATCGCGTAACAATTACTGACGATGCAATCGAAGCAT
CTGTCCAATTATCAGACCGCTATATTTCAGACCGGTTCCTGCCGGATAAAGCGATCGATTTAATTGATGAAGCAGCTTCA
AAAGTACGTCTTCGTTCATATACAGCTCCGCCAAACTTGAAGGAACTGGAGCAGAAACTGGAAGAAGTCCGCAAAGAAAA
AGACGCAGCTGTTCAAAGCCAGGAGTTTGAAAAAGCCGCATCACTGCGCGATTCTGAACAGCGTTTACGTGAGGAACTGG
AAAAAACAAAAGATGTTTGGAAAGAGAAACAAGGAAAAGAAAATACAGAAGTTACACCGGAAGATATCGCACAAGTGGTG
TCATCTTGGACGGGAGTTCCTGTTTCAAAGCTAGCTGAAGAGGAAACAGAACGTCTGTTGAAAATGGAAGAAATTCTTCA
TGACCGTGTGATCGGTCAGGCTGAAGCTGTTACGGCAATTTCGAAAGCGATCCGCCGAGCTCGCGCAGGTTTGAAAGATC
CGAAACGTCCGATTGGTTCCTTTATTTTCTTAGGACCAACAGGTGTTGGTAAAACAGAACTTGCAAGAGCAGTAGCTGAA
ACATTGTTCGGTGATGAAGACGCGATTATCCGTATCGATATGTCCGAGTACATGGAGAAGCATACGACTTCCCGCTTAGT
AGGTTCGCCTCCAGGTTATGTTGGCCACGAAGAAGGCGGCCAGTTAACGGAAAAAGTAAGAAGAAAACCGTATTCCGTTA
TTTTGCTCGACGAGATTGAAAAAGCGCATCCAGAAGTATTCAACATCCTGCTTCAAGTGCTTGAAGATGGTCGTTTGACT
GATTCTAAAGGGCGTACAGTCGATTTCAGAAACACGGTTGTTATCATGACATCAAACGTTGGTGCGAGCACGCTCAAACG
TAACCGTTCATTAGGATTTGCAGTAAATGATCTAAACCAAAAATACAATGATATGAAAACAAAGGTAATGGATGAGCTTA
AGAGAGCTTTCCGTCCTGAGTTCCTTAACCGTATTGACGAGATTATCGTGTTCCACTCTCTTGAAAAAGAACATCTTCTC
AAGATTGTCAGCTTAATGTCTGACGCATTGAAAAAACGCTTAAGCGATCAAGGAATCGATATTGAATTAACGCAGGCAGC
GTTAGAGAAGATTACGGAAGAAGGATATGATCCAGACTACGGAGCACGGCCGCTTCGTAGAGCACTTCAGCGAAAAATTG
AAGACCGTCTATCAGAAGAGCTGCTTAGAGGAAACATCAATAAGGGTCAAACCGTTAAAATTGATGTAGAGCAGAATGAT
TTTGTAGTAGAAACGGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.59 |
99.876 |
0.855 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.379 |
99.504 |
0.481 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.39 |
100 |
0.476 |
| clpC | Streptococcus thermophilus LMD-9 |
45.411 |
100 |
0.473 |
| clpC | Streptococcus mutans UA159 |
44.139 |
100 |
0.458 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.173 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.173 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae Rx1 |
45.173 |
100 |
0.453 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.509 |
85.236 |
0.431 |
| clpE | Streptococcus mutans UA159 |
54.823 |
77.171 |
0.423 |
| clpE | Streptococcus pneumoniae Rx1 |
53.459 |
78.908 |
0.422 |
| clpE | Streptococcus pneumoniae D39 |
53.459 |
78.908 |
0.422 |
| clpE | Streptococcus pneumoniae R6 |
53.459 |
78.908 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.302 |
78.908 |
0.421 |