Detailed information NTG0878359

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RGB74_RS03265
• Genome accession: NZ_CP134049
• Coordinates: 707676..708824 (+)
• Length: 382 a.a.
• NCBI ID: WP_310761568.1
• Uniprot ID: -
• Organism: Bacillus sp. NEB1478
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 702676..713824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RGB74_RS03245 (RGB74_03245)	-	703225..704307 (+)	1083	WP_310761564.1	MraY family glycosyltransferase	-
RGB74_RS03250 (RGB74_03250)	-	704466..705524 (+)	1059	WP_310761565.1	MraY family glycosyltransferase	-
RGB74_RS03255 (RGB74_03255)	-	705561..706571 (-)	1011	WP_310761566.1	LCP family protein	-
RGB74_RS03260 (RGB74_03260)	-	706728..707363 (-)	636	WP_310761567.1	YigZ family protein	-
RGB74_RS03265 (RGB74_03265)	degS	707676..708824 (+)	1149	WP_310761568.1	histidine kinase	Regulator
RGB74_RS03270 (RGB74_03270)	degU	708837..709568 (+)	732	WP_310761569.1	response regulator transcription factor	Regulator
RGB74_RS03275 (RGB74_03275)	-	709653..710573 (+)	921	WP_310761570.1	ROK family protein	-
RGB74_RS03280 (RGB74_03280)	-	710714..711562 (+)	849	WP_310761571.1	DegV family protein	-
RGB74_RS03285 (RGB74_03285)	-	711614..713110 (+)	1497	WP_310761572.1	DEAD/DEAH box helicase	-
RGB74_RS03290 (RGB74_03290)	-	713107..713817 (+)	711	WP_310761573.1	ComF family protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 44086.48 Da
• Isoelectric Point: 7.5625

>NTDB_id=878359 RGB74_RS03265 WP_310761568.1 707676..708824(+) (degS) [Bacillus sp. NEB1478]
MSAAKLAIDPHLLDGILNKTIDTVTESQSQIFEINENSRQQFQQLQRDLAGVKEQVIEVISKVDLTENHAKLARTRLAEV
SKHFQKYSESDIRDAYENANKYQIELSIIRQTEKQLREKRDELERRILGLQETVQKAENLSGQISVVLNYLNGDLRKINE
LVRDAKQKQEFGLQIIEAQEEERKRLSREIHDGPAQLMANMLIRSELLEKIFVERGTEAARAEIKDLRVMIRDSLKEVRR
IIYDLRPMALDDLGIVPTLDKYLRNLKESTGLDIELQAMGESRRFHHKMEIAIFRLIQESVNNALKHANSKVIQVKLEIT
KKFVSIYVRDDGKGFDTSQPSNTNSFGMMGMRERVDLLEGSLKVNSRLNFGTSVYIQIPIRD

Nucleotide

• Length: 1149 bp

>NTDB_id=878359 RGB74_RS03265 WP_310761568.1 707676..708824(+) (degS) [Bacillus sp. NEB1478]
ATGTCTGCAGCAAAATTAGCGATAGATCCACATTTATTAGACGGAATATTGAATAAAACCATCGATACTGTAACGGAAAG
CCAGTCTCAAATCTTTGAGATCAATGAAAACTCACGTCAGCAATTTCAACAATTACAGCGTGATTTGGCAGGGGTTAAAG
AACAGGTTATTGAGGTAATCAGCAAGGTTGATCTTACCGAAAACCATGCGAAGCTTGCCAGAACCCGTCTTGCTGAAGTG
AGCAAGCATTTTCAGAAGTACAGTGAATCCGATATTCGGGACGCTTATGAGAATGCCAACAAGTATCAAATTGAACTGTC
TATTATTAGACAGACTGAAAAACAGCTACGCGAAAAGAGAGACGAACTGGAGAGACGGATTCTCGGACTTCAGGAAACGG
TTCAAAAAGCGGAAAATCTCTCAGGTCAGATATCGGTTGTATTGAATTATTTAAACGGTGACTTGCGTAAGATTAATGAA
CTTGTTCGAGATGCTAAACAAAAGCAGGAATTTGGTCTTCAGATCATTGAGGCACAAGAAGAAGAACGAAAACGGCTGTC
CCGTGAAATTCATGATGGACCGGCACAGTTAATGGCCAATATGCTGATTCGCTCGGAACTGCTCGAGAAAATCTTTGTGG
AAAGAGGAACAGAAGCAGCGCGTGCCGAAATTAAAGACTTAAGGGTTATGATTCGGGATTCGCTGAAAGAAGTTCGCAGA
ATCATTTATGACCTGCGCCCGATGGCATTAGATGATCTGGGCATCGTTCCTACTTTAGATAAGTATTTACGCAACCTAAA
AGAGAGCACTGGCCTCGATATTGAATTGCAAGCTATGGGTGAGTCGCGGCGTTTCCATCACAAAATGGAGATCGCGATAT
TCCGGCTGATTCAAGAGTCAGTCAATAATGCTTTAAAGCATGCTAATTCAAAGGTCATACAAGTTAAACTCGAGATTACC
AAAAAGTTCGTCTCGATCTATGTTCGGGATGATGGTAAAGGATTCGATACGTCACAGCCTTCCAATACGAATTCGTTTGG
AATGATGGGTATGCGTGAGCGTGTTGATCTGCTCGAAGGATCATTAAAAGTTAATTCTCGCTTGAACTTCGGTACAAGTG
TTTATATTCAAATTCCCATTCGAGACTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (290-380)

• Sensor protein DegS (DegS) (14-172)

• Histidine kinase (HisKA_3) (182-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	54.331	99.738	0.542