Detailed information NTG0878090

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: QQE96_RS01415
• Genome accession: NZ_CP133986
• Coordinates: 301823..302923 (-)
• Length: 366 a.a.
• NCBI ID: WP_168780421.1
• Uniprot ID: -
• Organism: Vibrio aestuarianus subsp. francensis strain LC_Sco
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 296823..307923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQE96_RS01400 (QQE96_01400)	glpD	296909..298444 (+)	1536	WP_394353553.1	glycerol-3-phosphate dehydrogenase	-
QQE96_RS01405 (QQE96_01405)	-	298587..299267 (+)	681	WP_168524530.1	PilZ domain-containing protein	-
QQE96_RS01410 (QQE96_01410)	luxQ	299244..301808 (-)	2565	WP_168524529.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
QQE96_RS01415 (QQE96_01415)	luxP	301823..302923 (-)	1101	WP_168780421.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
QQE96_RS01420 (QQE96_01420)	traF	303140..304291 (-)	1152	WP_168524901.1	conjugal transfer protein TraF	-
QQE96_RS01425 (QQE96_01425)	-	304385..304690 (-)	306	WP_168524527.1	GIY-YIG nuclease family protein	-
QQE96_RS01430 (QQE96_01430)	-	304694..305347 (-)	654	WP_168524526.1	YceH family protein	-
QQE96_RS01435 (QQE96_01435)	-	305393..305590 (-)	198	WP_053310547.1	hypothetical protein	-
QQE96_RS01440 (QQE96_01440)	-	305779..306096 (+)	318	WP_053310546.1	DUF496 family protein	-
QQE96_RS01445 (QQE96_01445)	-	306410..306661 (+)	252	WP_053310545.1	YgjV family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 41660.66 Da
• Isoelectric Point: 6.9213

>NTDB_id=878090 QQE96_RS01415 WP_168780421.1 301823..302923(-) (luxP) [Vibrio aestuarianus subsp. francensis strain LC_Sco]
MKKILLNFLVLSFALLMTAQASAQLLNGYWQYQEFLDLNPEQKILTNKMTETVSHAPIPLSKKQTKPVNISVVYPGQQVS
DYWIRNIKAFEMRLDELGINYQINQVFTRPNVDIRQQSLSLIEAIKNKSDYLIFTLDTTRHRKFIEQIQSAKKTKIILQN
ITTPLKSWADRQPFIYVGFDHKTGAMQLADYYKKTIPAKGSYAVLYFSEGYVSDARGDTFIQEMTHDDNYQLVSSFYTKA
TRESAFDATIALLEKTPHIDFIYACATDVALGAMDALKLHHREDIKLNGWGGGSAELEAIQNGTLDVTVMRINDDTGIAM
AEAIKWDLEGKSVPTVYSGGFEVVTQDVPPQHIEMLKQRAFRYSDR

Nucleotide

• Length: 1101 bp

>NTDB_id=878090 QQE96_RS01415 WP_168780421.1 301823..302923(-) (luxP) [Vibrio aestuarianus subsp. francensis strain LC_Sco]
ATGAAAAAAATTTTGCTCAATTTTTTAGTCTTAAGTTTTGCATTACTGATGACGGCTCAGGCTTCTGCTCAACTCTTAAA
TGGTTACTGGCAGTATCAAGAGTTTTTGGATCTGAATCCAGAGCAAAAAATTTTAACTAACAAGATGACTGAAACGGTCA
GTCATGCTCCGATCCCACTTTCTAAAAAGCAAACCAAGCCAGTTAATATTTCGGTCGTGTACCCTGGACAGCAAGTTTCT
GATTATTGGATCCGTAATATCAAAGCATTTGAAATGCGATTAGATGAATTAGGCATCAACTATCAAATTAATCAGGTATT
TACTCGCCCTAATGTTGATATTCGCCAACAAAGTCTTTCTTTGATAGAAGCGATTAAAAATAAGTCCGATTATTTGATTT
TCACCCTCGACACCACTCGCCACCGTAAGTTTATTGAGCAAATTCAAAGTGCTAAAAAAACTAAAATCATATTACAAAAC
ATCACCACACCCTTGAAAAGCTGGGCTGATAGGCAACCTTTTATCTATGTGGGTTTTGATCATAAAACGGGTGCAATGCA
GCTAGCGGATTACTATAAGAAAACAATACCGGCTAAAGGTTCTTATGCTGTGCTTTATTTTTCTGAAGGGTATGTAAGTG
ATGCTCGCGGTGATACGTTTATTCAAGAAATGACCCACGATGATAACTATCAGTTAGTCTCTTCCTTTTATACTAAGGCA
ACTCGCGAGAGTGCGTTTGATGCCACCATAGCTCTTCTTGAAAAAACACCACACATAGACTTTATATACGCTTGTGCTAC
TGATGTAGCATTAGGAGCTATGGATGCTTTGAAACTTCACCATAGAGAAGATATTAAATTAAACGGTTGGGGTGGGGGAT
CGGCTGAACTAGAAGCGATACAAAATGGAACGCTTGATGTCACTGTGATGCGTATCAATGATGATACAGGTATTGCGATG
GCTGAAGCCATTAAGTGGGATCTAGAAGGTAAGTCCGTTCCGACAGTGTATTCGGGAGGTTTTGAAGTGGTCACCCAAGA
TGTTCCGCCTCAGCACATTGAAATGCTCAAACAACGTGCATTTCGTTACTCAGACCGTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (70-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	63.115	100	0.631