Detailed information NTG0878089

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: QQE96_RS01410
• Genome accession: NZ_CP133986
• Coordinates: 299244..301808 (-)
• Length: 854 a.a.
• NCBI ID: WP_168524529.1
• Uniprot ID: -
• Organism: Vibrio aestuarianus subsp. francensis strain LC_Sco
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 294244..306808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQE96_RS01390 (QQE96_01390)	-	295040..295327 (+)	288	WP_053310557.1	hypothetical protein	-
QQE96_RS01395 (QQE96_01395)	-	295447..296706 (+)	1260	WP_053310556.1	hydroxymethylglutaryl-CoA reductase	-
QQE96_RS01400 (QQE96_01400)	glpD	296909..298444 (+)	1536	WP_394353553.1	glycerol-3-phosphate dehydrogenase	-
QQE96_RS01405 (QQE96_01405)	-	298587..299267 (+)	681	WP_168524530.1	PilZ domain-containing protein	-
QQE96_RS01410 (QQE96_01410)	luxQ	299244..301808 (-)	2565	WP_168524529.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
QQE96_RS01415 (QQE96_01415)	luxP	301823..302923 (-)	1101	WP_168780421.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
QQE96_RS01420 (QQE96_01420)	traF	303140..304291 (-)	1152	WP_168524901.1	conjugal transfer protein TraF	-
QQE96_RS01425 (QQE96_01425)	-	304385..304690 (-)	306	WP_168524527.1	GIY-YIG nuclease family protein	-
QQE96_RS01430 (QQE96_01430)	-	304694..305347 (-)	654	WP_168524526.1	YceH family protein	-
QQE96_RS01435 (QQE96_01435)	-	305393..305590 (-)	198	WP_053310547.1	hypothetical protein	-
QQE96_RS01440 (QQE96_01440)	-	305779..306096 (+)	318	WP_053310546.1	DUF496 family protein	-
QQE96_RS01445 (QQE96_01445)	-	306410..306661 (+)	252	WP_053310545.1	YgjV family protein	-

Sequence

Protein

• Length: 854 a.a.
• Molecular weight: 96466.41 Da
• Isoelectric Point: 5.0825

>NTDB_id=878089 QQE96_RS01410 WP_168524529.1 299244..301808(-) (luxQ) [Vibrio aestuarianus subsp. francensis strain LC_Sco]
MSLRSSSVKKKQKIATLITKSVIAVIGILTLSVLFQSYQISSNIIAQEVQRTAVQTSRLIQNLFNFRLSLLQINQDSSAK
NANLVKAIRQDSNQLLDLYFLGVDQLEPINTPDIRFISNVDELIWEDGNAQFYGIARLDLAKMARKIALSSNWHMIKSGS
IYLMARRSPIIDLVSGEVVGLLHIATVLNNNFILAETLRDGSNSENLLITAGENILASTLNGNEIYSENDVLADSINQDD
FEELIVSRTNLTIEGVPIYIDVLSVQSNENVLKLRDNFYFWMVFALIAMACISVLTRWWLHRRVKNEISSLMIYTHKAAE
IGSYELFSGSKIYEFDHFGRTLEHTFKLLSEQEKQFEDLFNFSLSPIIVWDIDGQPIKMNPSAQKHFMHLNENQECLFDA
LQLELQPKIRQAAKEETFREVNVEVGNKVFRWNLSPIVFEQEIESIITQGQDITTIAEAAKQSRLARQEAEETARIRAEF
LAKMSHELRTPLNGILGVSQLLKRTVHSQEQREQVDVLCNSGEHLLAVLNDILDFSKIEQGQFRIQEADFKLVEVISAVE
SIYRPLCVAKNIDFKIEGNIAPDMVIHSDQVRLNQILFNLLNNATKFTHQGSICVEFLHKQVNDLDYLHIALSDTGIGIK
EQDLESIFEPFMQAESNTTREYGGSGLGLAIVKSLVEMLGGCISVESQFGVGTRFYIELPLTLGHASHDAFTAEGVLPSN
MFESTIKVLLVEDNHTNAFIAQAFCKKYKMEVIWVEDGLQAIDYLKEHRVDLILMDNQLPYLGGVETTQLIKYELGLDTP
VYACTADGMPSTSEAFLKAGAEYVIVKPIKEKALHAAFSHFQQQRVNLNRNLRS

Nucleotide

• Length: 2565 bp

>NTDB_id=878089 QQE96_RS01410 WP_168524529.1 299244..301808(-) (luxQ) [Vibrio aestuarianus subsp. francensis strain LC_Sco]
ATGAGTTTAAGATCTAGCAGCGTTAAAAAAAAGCAGAAAATAGCCACTCTGATTACCAAGTCGGTTATTGCTGTGATCGG
TATATTGACGTTGAGTGTGTTATTTCAAAGCTATCAGATCAGTAGCAATATCATTGCTCAAGAAGTGCAGCGAACAGCGG
TACAAACTTCTCGTTTGATTCAAAATCTGTTTAATTTTCGACTTTCATTGTTACAGATTAATCAAGATAGCAGTGCAAAG
AATGCTAATTTAGTGAAAGCCATCCGCCAAGACAGTAATCAATTATTGGATCTCTACTTTCTGGGAGTAGATCAGCTGGA
ACCTATCAATACTCCAGATATTCGCTTTATTTCGAATGTTGATGAGTTGATATGGGAAGATGGTAACGCTCAATTTTATG
GTATAGCACGACTAGATTTAGCGAAAATGGCCCGTAAGATTGCGCTCAGTAGCAACTGGCATATGATTAAGTCTGGGTCG
ATTTATTTGATGGCTAGGCGTTCACCAATTATTGATTTGGTGTCTGGTGAAGTGGTTGGTTTACTGCATATTGCTACTGT
ATTGAATAATAATTTCATACTAGCTGAAACATTACGAGATGGCAGTAACTCAGAAAACTTACTCATTACGGCTGGTGAAA
ATATCTTAGCTTCAACGCTCAACGGCAATGAAATCTACTCTGAAAATGATGTGTTAGCTGATAGCATCAACCAAGATGAT
TTTGAAGAGCTTATCGTTAGTCGCACTAATTTGACGATTGAAGGTGTGCCTATTTATATTGATGTGCTCAGTGTTCAAAG
TAATGAGAATGTACTCAAATTACGCGATAATTTCTATTTTTGGATGGTTTTCGCCTTAATTGCAATGGCGTGTATATCGG
TGTTAACTCGCTGGTGGCTACACCGACGAGTTAAGAACGAAATCAGTAGTTTGATGATTTACACCCATAAGGCGGCAGAA
ATCGGTAGTTATGAGCTATTTTCAGGTTCTAAAATTTATGAATTTGATCATTTTGGACGAACGCTAGAGCACACTTTTAA
GCTCCTGTCTGAGCAAGAAAAACAGTTTGAAGATCTGTTCAATTTCTCACTTTCCCCCATTATTGTATGGGACATCGACG
GTCAACCGATCAAAATGAATCCGTCTGCGCAAAAGCATTTTATGCACCTGAATGAGAATCAGGAGTGTCTATTTGACGCT
TTACAATTGGAACTACAACCTAAAATACGCCAAGCGGCGAAAGAAGAAACTTTCCGTGAAGTGAATGTAGAGGTGGGGAA
TAAAGTTTTCCGCTGGAATTTGTCGCCAATAGTGTTTGAACAAGAAATTGAATCGATCATTACCCAAGGACAGGATATTA
CGACCATTGCTGAAGCAGCCAAACAGAGTCGCCTTGCAAGGCAAGAGGCGGAAGAAACGGCCAGAATTCGTGCCGAATTC
TTAGCAAAAATGAGTCATGAACTGCGAACGCCATTAAACGGTATTTTAGGGGTATCCCAATTACTCAAGCGAACCGTTCA
TAGCCAAGAGCAGCGTGAGCAAGTGGATGTGCTATGCAATAGTGGCGAGCATTTACTGGCGGTACTCAATGATATCCTCG
ATTTTTCTAAAATTGAACAAGGTCAATTTAGGATTCAAGAGGCTGATTTTAAATTGGTTGAAGTGATTTCTGCGGTTGAG
AGTATCTACCGTCCACTTTGCGTAGCGAAAAATATCGACTTCAAGATCGAAGGAAATATTGCACCAGATATGGTTATCCA
TAGTGACCAGGTGCGTTTAAACCAAATTCTTTTTAACTTATTAAATAATGCAACCAAGTTTACCCATCAAGGCTCTATTT
GCGTCGAATTTCTTCACAAGCAAGTCAACGATTTAGATTATCTGCACATTGCTTTGTCTGATACTGGCATTGGCATTAAA
GAACAAGATCTTGAATCAATTTTTGAGCCCTTTATGCAAGCAGAATCGAATACAACTCGTGAATATGGAGGAAGTGGTTT
AGGGCTTGCGATAGTGAAGAGTTTGGTTGAGATGTTAGGTGGTTGCATTAGCGTTGAAAGTCAATTTGGTGTGGGGACGC
GGTTTTATATTGAGTTGCCACTTACCTTAGGTCATGCCTCCCATGATGCGTTTACTGCTGAAGGCGTACTGCCAAGCAAC
ATGTTTGAAAGTACGATCAAAGTTTTACTTGTTGAAGATAACCATACCAACGCTTTTATTGCCCAAGCTTTTTGCAAGAA
ATATAAGATGGAAGTGATTTGGGTTGAAGATGGTCTACAAGCAATTGATTATTTGAAGGAGCATAGGGTAGACCTTATTC
TCATGGATAACCAACTTCCATACTTAGGCGGTGTGGAGACTACACAATTGATTAAGTATGAATTGGGGTTAGATACGCCA
GTTTATGCTTGTACTGCCGATGGCATGCCGTCAACCAGTGAAGCGTTTCTTAAGGCTGGCGCTGAGTATGTGATCGTCAA
ACCGATCAAAGAAAAAGCACTGCATGCTGCATTTAGTCACTTTCAGCAACAACGGGTTAATTTAAATCGTAACCTGAGAA
GTTAA

Domains

Predicted by InterproScan.

• LuxQ, periplasmic (LuxQ-periplasm) (41-274)

• Response regulator receiver domain (Response_reg) (728-837)

• His Kinase A (phospho-acceptor) domain (HisKA) (477-541)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (589-702)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	57.259	100	0.577