Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RIM73_RS01340 Genome accession   NZ_CP133956
Coordinates   242675..243940 (+) Length   421 a.a.
NCBI ID   WP_015898575.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi strain HTP232     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 237675..248940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM73_RS01315 (RIM73_01315) - 238353..239972 (+) 1620 WP_015898578.1 alpha-glucosidase -
  RIM73_RS01320 (RIM73_01320) - 240141..240443 (+) 303 WP_074632271.1 thioredoxin domain-containing protein -
  RIM73_RS01325 (RIM73_01325) yajC 240557..240916 (+) 360 WP_015898577.1 preprotein translocase subunit YajC -
  RIM73_RS01330 (RIM73_01330) - 241090..241839 (+) 750 WP_012677325.1 isoprenyl transferase -
  RIM73_RS01335 (RIM73_01335) - 241849..242643 (+) 795 WP_317582905.1 phosphatidate cytidylyltransferase -
  RIM73_RS01340 (RIM73_01340) eeP 242675..243940 (+) 1266 WP_015898575.1 RIP metalloprotease RseP Regulator
  RIM73_RS01345 (RIM73_01345) - 244210..246066 (+) 1857 WP_015898574.1 proline--tRNA ligase -
  RIM73_RS01350 (RIM73_01350) - 246118..246675 (+) 558 WP_015898573.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45998.51 Da        Isoelectric Point: 5.9240

>NTDB_id=877895 RIM73_RS01340 WP_015898575.1 242675..243940(+) (eeP) [Streptococcus equi subsp. equi strain HTP232]
MLGIITFIIIFGILVLVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDEIKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=877895 RIM73_RS01340 WP_015898575.1 242675..243940(+) (eeP) [Streptococcus equi subsp. equi strain HTP232]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGCTTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTAGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACAACTGAGATAAAAACA
GGAACGCCTGCTAGCTTAACGCTTAATGATCAGGGCTTGGTCAAGCGGATTAACCTGTCTCAGAGCAAGCTTGATCCGAC
TAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGATCAAGA
CCTATTCGGTAGACCATGACGCGACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.095

99.762

0.679

  eeP Streptococcus thermophilus LMD-9

67.857

99.762

0.677