Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RIM63_RS09500 Genome accession   NZ_CP133952
Coordinates   1949157..1950416 (-) Length   419 a.a.
NCBI ID   WP_317584009.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain HT321     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1944157..1955416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM63_RS09490 (RIM63_09490) - 1946417..1946974 (-) 558 WP_037579524.1 nucleotidyltransferase family protein -
  RIM63_RS09495 (RIM63_09495) - 1947026..1948882 (-) 1857 WP_043053442.1 proline--tRNA ligase -
  RIM63_RS09500 (RIM63_09500) eeP 1949157..1950416 (-) 1260 WP_317584009.1 M50 family metallopeptidase Regulator
  RIM63_RS09505 (RIM63_09505) - 1950448..1951242 (-) 795 WP_301899716.1 phosphatidate cytidylyltransferase -
  RIM63_RS09510 (RIM63_09510) - 1951252..1952001 (-) 750 WP_012677325.1 isoprenyl transferase -
  RIM63_RS09515 (RIM63_09515) yajC 1952175..1952534 (-) 360 WP_317584011.1 preprotein translocase subunit YajC -
  RIM63_RS09520 (RIM63_09520) traF 1952648..1953010 (-) 363 WP_014623564.1 conjugal transfer protein TraF -
  RIM63_RS09525 (RIM63_09525) - 1953119..1954735 (-) 1617 WP_317585305.1 alpha-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45757.26 Da        Isoelectric Point: 6.1700

>NTDB_id=877790 RIM63_RS09500 WP_317584009.1 1949157..1950416(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain HT321]
MLGIITFIIIFGILVIVHEFGHFYFAKRSGILVREFAIGMGPKIFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIKDNDQILEINHQKINDWYELTQ
AVATSTADVKAKGKLEITYQTGDQVKTIALKPEKRGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKGLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=877790 RIM63_RS09500 WP_317584009.1 1949157..1950416(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain HT321]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGATCGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
GCGGTCTGGTATTTTGGTCAGAGAATTTGCTATTGGCATGGGACCAAAAATCTTTTCGCATGTTGATCAGCAAGGGACGC
TTTACACGATCCGACTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACGACTGAGATAAAAACA
GGAACACCTGCTAGCTTGACGCTTAATGATCAGGGCTTGGTCAAGCGGATTAACCTGTCTCAGAGCAAGCTTGATCCAAC
CAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAGGATAAGTTGACGATTACTGGGCTGGTTCTTGATGAGACAAAGA
CCTATTCGGTAGACCATGACGCGACCATTGTTGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGGCCTATGAATAACTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAGGGTGGTGTGGCTGATTATCATAGCAATCATATTCGTGTGGTGGAAAATGGTGCAGCAG
CCAAGGCCGGTATTAAAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGCTGACGCAG
GCAGTTGCTACATCAACAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCGCTGAAGCCTGAAAAAAGAGGTGACCAGTATCTTATTGGTGTCCAATACCCGCTAAAAACAAGTCTGACAGACA
AGCTAATAGGGGGCTTTGAGATGGCTGGTAATGGTGCTTTAGTGATTGTCACTGCTCTAAAGGGCTTGATCACCTCCTTT
AGTCTGGATAAATTAGGTGGGCCGGTTGCCATGTATCAGATGTCCAATCAGGCAGCTAAGAATGGCTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATCGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTTGTGCTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(206-244)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.286

100

0.695

  eeP Streptococcus thermophilus LMD-9

69.048

100

0.692