Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   RIM64_RS03315 Genome accession   NZ_CP133951
Coordinates   669153..669962 (+) Length   269 a.a.
NCBI ID   WP_021320992.1    Uniprot ID   A0AAW3GKW3
Organism   Streptococcus equi subsp. zooepidemicus strain JMC111     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 664153..674962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM64_RS03295 (RIM64_03295) - 664561..665823 (+) 1263 WP_111690290.1 AMP-binding protein -
  RIM64_RS03300 (RIM64_03300) - 665869..666885 (+) 1017 WP_165619478.1 DUF3114 domain-containing protein -
  RIM64_RS03305 (RIM64_03305) vicR 667094..667804 (+) 711 WP_012515994.1 response regulator YycF Regulator
  RIM64_RS03310 (RIM64_03310) vicK 667797..669149 (+) 1353 WP_014623188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  RIM64_RS03315 (RIM64_03315) vicX 669153..669962 (+) 810 WP_021320992.1 MBL fold metallo-hydrolase Regulator
  RIM64_RS03320 (RIM64_03320) - 670841..672355 (+) 1515 WP_317583236.1 helix-turn-helix domain-containing protein -
  RIM64_RS03325 (RIM64_03325) rnc 672614..673306 (+) 693 WP_165619541.1 ribonuclease III -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30011.07 Da        Isoelectric Point: 5.5344

>NTDB_id=877706 RIM64_RS03315 WP_021320992.1 669153..669962(+) (vicX) [Streptococcus equi subsp. zooepidemicus strain JMC111]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=877706 RIM64_RS03315 WP_021320992.1 669153..669962(+) (vicX) [Streptococcus equi subsp. zooepidemicus strain JMC111]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGGCCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGATCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTAGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751