Detailed information NTG0877658

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: RIM62_RS07345
• Genome accession: NZ_CP133950
• Coordinates: 1537104..1539359 (+)
• Length: 751 a.a.
• NCBI ID: WP_115267039.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain ZHZ211
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1532104..1544359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM62_RS07325 (RIM62_07325)	-	1533094..1533831 (-)	738	WP_012515254.1	amino acid ABC transporter ATP-binding protein	-
RIM62_RS07330 (RIM62_07330)	-	1533833..1534516 (-)	684	WP_043029481.1	amino acid ABC transporter permease	-
RIM62_RS07335 (RIM62_07335)	-	1534858..1536147 (+)	1290	WP_231148166.1	LPXTG cell wall anchor domain-containing protein	-
RIM62_RS07340 (RIM62_07340)	-	1536592..1536822 (-)	231	WP_012515249.1	DUF1797 family protein	-
RIM62_RS07345 (RIM62_07345)	clpE	1537104..1539359 (+)	2256	WP_115267039.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
RIM62_RS07350 (RIM62_07350)	-	1539506..1539952 (+)	447	WP_043025456.1	NUDIX hydrolase	-
RIM62_RS07355 (RIM62_07355)	-	1540014..1540316 (+)	303	WP_012515246.1	DUF1827 family protein	-
RIM62_RS07360 (RIM62_07360)	ileS	1540786..1543584 (-)	2799	WP_282884746.1	isoleucine--tRNA ligase	-

Sequence

Protein

• Length: 751 a.a.
• Molecular weight: 83922.32 Da
• Isoelectric Point: 5.7427

>NTDB_id=877658 RIM62_RS07345 WP_115267039.1 1537104..1539359(+) (clpE) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
MLCQNCNLNESTIHLYTSINGKQRQIDLCQNCYQIMKTDPKNPILGGYTGNQKAQQQSQNPFFDDFFGDLNNFRAFGQLP
NTPPTQSGGQHGGGHNGGYRPNHTQPAQETNKGLLEEFGINITEMAKRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPQKLQSKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKRHDVILFIDEIHEIVGAG
AVGDGSMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQPKYEDYHHVKYSQ
SAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKTQATRDEDYERAAYFRDQIAKYK
EMQAQKLDEQDIPIITDKTIEAIVEQKTNIPVGDLKEKEQSQLVNLAADLKKHVIGQDDAVDKIAKAIRRNRVGLGAPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRRNPYSLILL
DEIEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSHFFSPEFMN
RFDGIIEFQPLSKDNLLHIVHLMLDDVNHRLAHNNIHLDVTQKVKEKLVELGYDPKMGARPLRRTIQDYIEDAITDFYLE
HPAEKDLRAVLTSNGHIIIKPVVKSQAKQAD

Nucleotide

• Length: 2256 bp

>NTDB_id=877658 RIM62_RS07345 WP_115267039.1 1537104..1539359(+) (clpE) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
ATGCTTTGTCAAAACTGTAATTTAAACGAATCAACTATTCATCTTTATACAAGTATTAACGGAAAGCAAAGACAGATTGA
TCTGTGCCAAAATTGCTACCAAATCATGAAAACAGACCCTAAAAATCCTATCCTGGGAGGCTATACTGGCAATCAAAAGG
CCCAGCAGCAGTCTCAAAACCCTTTCTTTGATGACTTTTTTGGTGACCTCAACAACTTTAGAGCCTTTGGTCAGCTCCCC
AATACACCACCTACCCAATCAGGAGGCCAGCATGGCGGAGGTCACAACGGTGGCTACCGTCCCAATCACACACAGCCAGC
ACAAGAGACTAACAAAGGTTTGCTTGAGGAATTCGGCATTAATATCACTGAAATGGCTAAGCGTGGTGATATTGATCCTG
TCATCGGACGTGACGATGAGATTATCCGCGTGATCGAGATTCTCAACCGTCGTACCAAAAATAACCCTGTCCTAATCGGA
GAACCAGGTGTTGGTAAGACTGCTGTCGTTGAAGGCCTTGCTCAAAAAATCGTTGATGGCGATGTGCCACAAAAGCTACA
GAGTAAGCAGGTGATTCGCCTTGATGTGGTTAGCCTCGTTCAGGGGACAGGTATTCGTGGCCAATTTGAAGAGCGCATGC
AAAAGCTCATGGAAGAAATCCGCAAGCGCCATGACGTGATTCTATTTATTGATGAAATCCATGAAATTGTGGGAGCTGGT
GCAGTTGGTGACGGCAGCATGGACGCAGGAAATATTTTAAAGCCAGCACTTGCTCGTGGTGAGCTTCAATTAGTGGGAGC
GACCACTCTCAATGAATACCGCATCATCGAAAAGGACGCAGCCCTTGAGCGACGCATGCAGCCGGTTAAGGTGGATGAGC
CCTCGGTTGAAGAAACAATCACTATCCTAAAAGGAATCCAACCCAAATATGAGGACTATCATCATGTCAAATATAGCCAG
TCAGCTATCGAAGCAGCTGCTAACCTCTCCAACCGCTATATTCAAGACCGCTTCTTGCCTGATAAGGCCATTGACCTGCT
AGATGAAGCCGGCTCAAAGATGAACCTAACCCTTAACTTTGTTGACCCCAAAGACATTGATAAGCGTTTGATTGAGGCTG
AAAACCTCAAGACACAAGCCACACGTGATGAGGATTATGAGCGAGCAGCCTATTTCCGCGATCAAATCGCCAAATATAAA
GAAATGCAGGCTCAAAAGCTAGATGAGCAGGATATTCCAATCATCACTGACAAGACCATCGAAGCAATCGTTGAGCAAAA
AACCAATATTCCAGTTGGTGATTTAAAGGAAAAGGAACAATCACAGCTAGTCAATCTGGCCGCCGATCTCAAAAAGCATG
TTATCGGTCAAGACGATGCTGTTGATAAAATTGCAAAAGCTATCCGTCGTAATCGTGTTGGACTGGGAGCCCCAAATCGT
CCTATCGGCTCCTTCCTCTTTGTTGGGCCGACTGGTGTCGGTAAAACAGAGCTTTCCAAGCAATTAGCCATTGAGCTTTT
TGGCTCTGCTGATAACATGATTCGCTTTGACATGTCTGAATACATGGAAAAGCACGCTGTGGCTAAGCTTGTCGGTGCCC
CTCCAGGCTACGTCGGCTACGAGGAAGCAGGTCAGCTAACAGAGCAGGTGCGCCGCAACCCTTATTCACTCATTCTTTTA
GATGAAATCGAAAAAGCCCACCCTGATGTCATGCACATGTTTTTACAGGTCCTAGATGACGGTCGATTGACTGATGGTCA
GGGACGAACCGTTAGCTTCAAGGACACTATTATCATCATGACGTCAAATGCTGGCACCGGCAAAACAGAAGCCTCAGTCG
GCTTTGGTGCTGCTAGAGAAGGACGGACAAACTCTGTCCTAGGTGAGCTTAGTCATTTCTTTAGTCCCGAATTTATGAAC
CGCTTTGACGGGATTATTGAGTTTCAGCCGCTAAGCAAGGACAATCTTTTACATATCGTTCATTTAATGCTCGATGATGT
TAACCACCGCCTTGCTCACAATAACATTCACCTTGATGTCACCCAAAAGGTCAAGGAAAAGCTCGTCGAGCTAGGCTATG
ATCCTAAGATGGGAGCACGACCATTGCGCCGCACCATTCAGGACTACATTGAGGATGCCATTACCGACTTCTACCTTGAG
CACCCAGCAGAAAAAGACCTGCGAGCTGTCCTGACCTCTAATGGACACATTATAATCAAGCCTGTAGTCAAATCTCAGGC
GAAGCAGGCGGACTAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (295-392)

• AAA domain (Cdc48 subfamily) (AAA_2) (480-643)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (651-725)

• ATPase family associated with various cellular activities (AAA) (AAA) (157-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	84.677	99.068	0.839
clpE	Streptococcus pneumoniae Rx1	82.47	100	0.827
clpE	Streptococcus pneumoniae D39	82.47	100	0.827
clpE	Streptococcus pneumoniae R6	82.47	100	0.827
clpE	Streptococcus pneumoniae TIGR4	82.337	100	0.826
clpC	Lactococcus lactis subsp. cremoris KW2	75.399	100	0.755
clpC	Bacillus subtilis subsp. subtilis str. 168	49.926	90.146	0.45
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.729	85.486	0.399
clpC	Streptococcus pneumoniae Rx1	47.903	82.557	0.395
clpC	Streptococcus pneumoniae D39	47.903	82.557	0.395
clpC	Streptococcus pneumoniae TIGR4	47.742	82.557	0.394
clpC	Streptococcus mutans UA159	47.343	82.69	0.391
clpC	Streptococcus thermophilus LMD-9	46.349	83.888	0.389
clpC	Streptococcus thermophilus LMG 18311	46.032	83.888	0.386