Detailed information NTG0877659

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: RIM62_RS07480
• Genome accession: NZ_CP133950
• Coordinates: 1565887..1566924 (-)
• Length: 345 a.a.
• NCBI ID: WP_014622492.1
• Uniprot ID: A0A6D2LSH8
• Organism: Streptococcus equi subsp. zooepidemicus strain ZHZ211
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1560887..1571924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM62_RS07460 (RIM62_07460)	-	1561369..1562094 (-)	726	WP_012515226.1	ABC transporter permease	-
RIM62_RS07465 (RIM62_07465)	-	1562098..1562976 (-)	879	WP_012678317.1	ABC transporter ATP-binding protein	-
RIM62_RS07470 (RIM62_07470)	rlmN	1563567..1564649 (-)	1083	WP_159334707.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
RIM62_RS07475 (RIM62_07475)	-	1564653..1565267 (-)	615	WP_012678319.1	YutD family protein	-
RIM62_RS07480 (RIM62_07480)	sepM	1565887..1566924 (-)	1038	WP_014622492.1	SepM family pheromone-processing serine protease	Regulator
RIM62_RS07485 (RIM62_07485)	coaD	1566902..1567402 (-)	501	WP_165619171.1	pantetheine-phosphate adenylyltransferase	-
RIM62_RS07490 (RIM62_07490)	rsmD	1567392..1567931 (-)	540	WP_012678322.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RIM62_RS07495 (RIM62_07495)	asnA	1568105..1569097 (-)	993	WP_165619170.1	aspartate--ammonia ligase	-
RIM62_RS07500 (RIM62_07500)	arcC	1569316..1570266 (-)	951	WP_012515218.1	carbamate kinase	-
RIM62_RS07505 (RIM62_07505)	-	1570284..1571615 (-)	1332	WP_282884747.1	dipeptidase	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37450.05 Da
• Isoelectric Point: 9.2833

>NTDB_id=877659 RIM62_RS07480 WP_014622492.1 1565887..1566924(-) (sepM) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
MKTIKKFKWWLIGFVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVDKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide

• Length: 1038 bp

>NTDB_id=877659 RIM62_RS07480 WP_014622492.1 1565887..1566924(-) (sepM) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTTGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCAGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAATGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGGATAAGGACGTCAAAAAAGCAAATCCTAAGGCTATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (130-193)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (233-311)

3D structure

• AlphaFold DB: A0A6D2LSH8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	70.145	100	0.701