Detailed information NTG0087700

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PszF2a_RS13645
• Genome accession: NZ_AP024722
• Coordinates: 2898893..2901118 (-)
• Length: 741 a.a.
• NCBI ID: WP_221292205.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain F2a
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2893893..2906118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PszF2a_RS13610 (PszF2a_26600)	murB	2894283..2895302 (-)	1020	WP_221292202.1	UDP-N-acetylmuramate dehydrogenase	-
PszF2a_RS13615 (PszF2a_26610)	-	2895299..2895766 (-)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
PszF2a_RS13620 (PszF2a_26620)	kdsB	2895768..2896532 (-)	765	WP_221292203.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PszF2a_RS13625 (PszF2a_26630)	-	2896529..2896714 (-)	186	WP_011913743.1	Trm112 family protein	-
PszF2a_RS13630 (PszF2a_26640)	lpxK	2896760..2897764 (-)	1005	WP_013983258.1	tetraacyldisaccharide 4'-kinase	-
PszF2a_RS13635 (PszF2a_26650)	-	2897764..2898192 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
PszF2a_RS13640 (PszF2a_26660)	-	2898189..2898821 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
PszF2a_RS13645 (PszF2a_26670)	comA	2898893..2901118 (-)	2226	WP_221292205.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PszF2a_RS13650 (PszF2a_26680)	-	2901263..2901778 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
PszF2a_RS13655 (PszF2a_26690)	-	2901791..2903035 (-)	1245	WP_221293442.1	lipoprotein-releasing ABC transporter permease subunit	-
PszF2a_RS13660 (PszF2a_26700)	lolD	2903035..2903733 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PszF2a_RS13665 (PszF2a_26710)	-	2903741..2904988 (-)	1248	WP_020307157.1	lipoprotein-releasing ABC transporter permease subunit	-
PszF2a_RS13670 (PszF2a_26720)	-	2905021..2905656 (+)	636	WP_221292211.1	PilZ domain-containing protein	-
PszF2a_RS13675 (PszF2a_26730)	-	2905660..2905968 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81085.73 Da
• Isoelectric Point: 10.1102

>NTDB_id=87700 PszF2a_RS13645 WP_221292205.1 2898893..2901118(-) (comA) [Stutzerimonas stutzeri strain F2a]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTSSDGWRDQLRARLMAIPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAAALGLLPLLLALGLPVSASGPLANLLAAPWVSLTVPF
ALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LLFPPRVEVPDGRAQVWVLDVGQGLAVFVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQHSCVLQIEANGERILLTGDIDQA
AERAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLEILDIRAYDTAVHGAIRI
ELGSFSPPRLQRLQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=87700 PszF2a_RS13645 WP_221292205.1 2898893..2901118(-) (comA) [Stutzerimonas stutzeri strain F2a]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGTACGTTCTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGTTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCAGGCGAGCGCCTGACGGCGTCGACGTCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCATTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGCTTCGAGGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCACCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCCGGCTTCTGGCTGTCATTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCGCTGACCCGGGCGCAGTGGGCGGCCGCCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGACTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGCACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCGTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGGTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCAGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGCTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GTTTGTACGCACTCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCACTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGATCCTCGATATCCGGGCCTACGACACCGCCGTGCATGGCGCAATCCGCATC
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTTGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-673)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.367	96.356	0.649
comA	Ralstonia pseudosolanacearum GMI1000	36.774	100	0.385